DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Jon74E

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001189126.2 Gene:Jon74E / 39959 FlyBaseID:FBgn0023197 Length:271 Species:Drosophila melanogaster


Alignment Length:287 Identity:86/287 - (29%)
Similarity:128/287 - (44%) Gaps:55/287 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 RRLHLTDTGRTFSGKQCVPSVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSE 227
            |.:...|.|....|:        |.||...|...||:...|     |..:..|:...||.:|:|:
  Fly    17 RSISCLDMGHGIGGR--------IAGGELARANQFPYQVGL-----SIEEPNDMYCWCGASLISD 68

  Fly   228 LYVLTAAHCATS--------GSKPPDMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDI 284
            .|:||||||...        |.    ::||..|||..::..:       :.|||.:...:..:||
  Fly    69 RYLLTAAHCVEKAVAITYYLGG----VLRLAPRQLIRSTNPE-------VHLHPDWNCQSLENDI 122

  Fly   285 ALLKLTRRVKFSEQVRPACLWQLPELQ--------IPTVVAAGWGR-TEFLGAKSNALRQVDLDV 340
            ||::|.......:.:||.   :||.|.        :| .:|:|||| .:...|.|:.||.|...|
  Fly   123 ALVRLPEDALLCDSIRPI---RLPGLSSSRNSYDYVP-AIASGWGRMNDESTAISDNLRYVYRFV 183

  Fly   341 VPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFG 405
            .....|:..|...:  |..|     |.. ..||:.||.||||||:....|..| ...::|:||:|
  Fly   184 ESNEDCEYSYANIK--PTNI-----CMD-TTGGKSTCTGDSGGPLVYSDPVQN-ADILIGVTSYG 239

  Fly   406 KFCAAPNA-PGVYTRLYSYLDWIEKIA 431
            |....... |.|:||:.:|||||.:::
  Fly   240 KKSGCTKGYPSVFTRITAYLDWIGEVS 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 82/261 (31%)
Jon74ENP_001189126.2 Tryp_SPc 31..262 CDD:214473 80/267 (30%)
Blue background indicates that the domain is not in the aligned region.

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