DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG4914

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_648711.1 Gene:CG4914 / 39597 FlyBaseID:FBgn0036436 Length:374 Species:Drosophila melanogaster


Alignment Length:319 Identity:104/319 - (32%)
Similarity:146/319 - (45%) Gaps:78/319 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 HRNNVPVICCPLADKHVLAQ-RISAT---KCQEYNAAARRLHLTDTGRTFSGKQCVPSVPLIVGG 189
            :|||.|.           || :.|.|   :|.|.|..:|                      ||||
  Fly   100 NRNNSPA-----------AQNQTSPTCSCRCGERNDESR----------------------IVGG 131

  Fly   190 TPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHC----------ATSGSKPP 244
            |.|....:|.||.|.:..         ::.|||.|:::.||||||||          .|.|... 
  Fly   132 TTTGVSEYPWMARLSYFN---------RFYCGGTLINDRYVLTAAHCVKGFMWFMIKVTFGEHD- 186

  Fly   245 DMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACL---WQ 306
               |...::..||       :.::.....|:..|.:.:|||||:|..||..:..:||.||   .|
  Fly   187 ---RCNDKERPET-------RFVLRAFSQKFSFSNFDNDIALLRLNDRVPITSFIRPICLPRVEQ 241

  Fly   307 LPELQIPT-VVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYL 370
            ..:|.:.| .:|.|||..:..|..|..|::|::.|:....|.......:::   |.:...|:|| 
  Fly   242 RQDLFVGTKAIATGWGTLKEDGKPSCLLQEVEVPVLDNDECVAQTNYTQKM---ITKNMMCSGY- 302

  Fly   371 P--GGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
            |  ||||:||||||||:..|.|:..... .:||.|:|..||.||.||||||:..|||||
  Fly   303 PGVGGRDSCQGDSGGPLVRLRPDDKRFE-QIGIVSWGNGCARPNYPGVYTRVTKYLDWI 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829 4/9 (44%)
Tryp_SPc 186..430 CDD:238113 92/258 (36%)
CG4914NP_648711.1 Tryp_SPc 128..363 CDD:238113 92/258 (36%)

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