DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG4613

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_648707.2 Gene:CG4613 / 39586 FlyBaseID:FBgn0036427 Length:374 Species:Drosophila melanogaster


Alignment Length:273 Identity:96/273 - (35%)
Similarity:137/273 - (50%) Gaps:44/273 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 RTFSGKQC------VPSVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWG---CGGALVSE 227
            :.|...:|      ||:|..|||||..|...:|.:|            |.|:..   |||.|:::
  Fly   117 KAFRVNRCASCTCGVPNVNRIVGGTQVRTNKYPWIA------------QIIRGTFLFCGGTLIND 169

  Fly   228 LYVLTAAHCATSGSKPPDMVRLGARQLN-ETSATQQDI--KILIIVLHPKYRSSAYYHDIALLKL 289
            .||||||||...    .||..:..|.|. :.|:|...:  .:.....|..|...:..||||||:|
  Fly   170 RYVLTAAHCVHG----MDMRGVSVRLLQLDRSSTHLGVTRSVAFAHAHVGYDPVSLVHDIALLRL 230

  Fly   290 TRRVKFSEQVRPACL---WQLPELQIPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQI-Y 350
            .:.:...:.:|||||   | |........:.||||.::..|:.|:.|::|.:.::....|:.. |
  Fly   231 DQPIPLVDTMRPACLPSNW-LQNFDFQKAIVAGWGLSQEGGSTSSVLQEVVVPIITNAQCRATSY 294

  Fly   351 RKERRLPRGIIEGQFCAGYL-PGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAP 414
            |..      |::...||||: .||||.||||||||    |...:.:..:.|:.|||..||.|:||
  Fly   295 RSM------IVDTMMCAGYVKTGGRDACQGDSGGP----LIVRDRIFRLAGVVSFGYGCAKPDAP 349

  Fly   415 GVYTRLYSYLDWI 427
            |||||:..||:||
  Fly   350 GVYTRVSRYLEWI 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 91/253 (36%)
CG4613NP_648707.2 Tryp_SPc 136..362 CDD:214473 89/252 (35%)
Blue background indicates that the domain is not in the aligned region.

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