DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG10469

DIOPT Version :9

Sequence 1:NP_001097766.1 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_648025.1 Gene:CG10469 / 38696 FlyBaseID:FBgn0035678 Length:267 Species:Drosophila melanogaster


Alignment Length:268 Identity:73/268 - (27%)
Similarity:121/268 - (45%) Gaps:56/268 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPD----- 245
            |:.||..:....|:...| .....||||:...  |||.::|..:::|||||.   ..|..     
  Fly    24 IMNGTAAKAKQLPYQVGL-LCYFEGSKDEPNM--CGGTILSNRWIITAAHCL---QDPKSNLWKV 82

  Fly   246 MVRLGARQLNETSATQQDIKILII-----VLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLW 305
            ::.:|       .....|.|.:::     ::|.|:......:||||:||.:::.|::.::||   
  Fly    83 LIHVG-------KVKSFDDKEIVVNRSYTIVHKKFDRKTVTNDIALIKLPKKLTFNKYIQPA--- 137

  Fly   306 QLPELQIP----TVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTC-----KQIYRKERRLPRGII 361
            :||..:..    ..:.:|||.|. ....|..|:.:...::....|     ||:..|.:::   :.
  Fly   138 KLPSAKKTYTGRKAIISGWGLTT-KQLPSQVLQYIRAPIISNKECERQWNKQLGGKSKKV---VH 198

  Fly   362 EGQFCAGY---LPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKF---CAAPNAPGVYTRL 420
            .|..|...   ||     |:||||||:  :|.:.:  ..:|||.|.| |   |.. ..|.|.||:
  Fly   199 NGFICIDSKKGLP-----CRGDSGGPM--VLDDGS--RTLVGIVSHG-FDGECKL-KLPDVSTRV 252

  Fly   421 YSYLDWIE 428
            .|||.||:
  Fly   253 SSYLKWIK 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_001097766.1 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 73/268 (27%)
Tryp_SPc 186..427 CDD:214473 71/265 (27%)
CG10469NP_648025.1 Tryp_SPc 23..259 CDD:214473 71/265 (27%)
Tryp_SPc 24..260 CDD:238113 72/266 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437060
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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