DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Jon65Aiii

DIOPT Version :9

Sequence 1:NP_001097766.1 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_648013.1 Gene:Jon65Aiii / 38683 FlyBaseID:FBgn0035665 Length:274 Species:Drosophila melanogaster


Alignment Length:275 Identity:80/275 - (29%)
Similarity:123/275 - (44%) Gaps:63/275 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 VPSVPLIVG----GTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSG 240
            :|:|..|.|    |.....|.||:...|.:...|||      |.|||:::...:||||||| |||
  Fly    30 LPAVTNIEGRITNGKTATSGQFPYQVGLSFASTSGS------WWCGGSIIDNTWVLTAAHC-TSG 87

  Fly   241 SKPPDM-----VRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVR 300
            :....:     ||..|:.:...||..       .|.|..|.|....:||:|:| |..|.|:..:.
  Fly    88 ASAVTIYYGATVRTSAQLVQTVSADN-------FVQHASYNSIVLRNDISLIK-TPTVAFTALIN 144

  Fly   301 PACLWQLPELQIPTV------------VAAGWGRT-EFLGAKSNALRQVDLDVVPQMTCKQIYRK 352
                    ::::|.:            :|:|||:| :...:.:|.|:....:||....|:..|  
  Fly   145 --------KVELPAIAGTYSTYTGQQAIASGWGKTSDSATSVANTLQYEVFEVVSVSQCQNTY-- 199

  Fly   353 ERRLPRGII---EGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPN-A 413
                  |.:   ....|.. .|....||.||||||: .|:.:    :.::|:|||.......: |
  Fly   200 ------GSLVATNNVICVA-TPNKVSTCNGDSGGPL-VLVSD----SKLIGVTSFVSSAGCESGA 252

  Fly   414 PGVYTRLYSYLDWIE 428
            |..:||:.||||||:
  Fly   253 PAGFTRVTSYLDWIK 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_001097766.1 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 78/269 (29%)
Tryp_SPc 186..427 CDD:214473 76/266 (29%)
Jon65AiiiNP_648013.1 Tryp_SPc 39..266 CDD:214473 74/263 (28%)
Tryp_SPc 40..269 CDD:238113 76/265 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437032
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
43.940

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