DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Jon65Aiv

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_648012.1 Gene:Jon65Aiv / 38682 FlyBaseID:FBgn0250815 Length:271 Species:Drosophila melanogaster


Alignment Length:303 Identity:85/303 - (28%)
Similarity:129/303 - (42%) Gaps:61/303 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 VLAQRISATKCQEYNAAARRLHLTDTGRTFSGKQCVPSVPLIVGGTPTRHGLFPHMAALGWTQGS 209
            :||..::|:...|.....|...:...| ...|:        |.||:....|.||:...|.....:
  Fly     6 ILALAVAASAFPEPELRHRSREMPVVG-DIGGR--------ITGGSNAAVGQFPYQVGLSLKLSA 61

  Fly   210 GSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLGARQLNETSATQQDIKILI----IV 270
            .|.    .| |||:|:...:||||||| |.|.:.. .|.|||     |..|..:|...:    |:
  Fly    62 LSS----AW-CGGSLIGSTWVLTAAHC-TDGVQSV-TVYLGA-----TVRTSAEITHTVSSSDII 114

  Fly   271 LHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPTV------------VAAGWGRT 323
            :|..:.|:...:||:|:|:......|         ::..:::|::            ||:|||||
  Fly   115 IHSGWNSANLRNDISLIKIPATSSSS---------RISAVKLPSISNSYSTFVGDVAVASGWGRT 170

  Fly   324 E--FLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIH 386
            .  ..|..:| |:.|||.|:....|.|.|...     .:.:...|.. ....:.||.||||||: 
  Fly   171 SDTSSGVATN-LQYVDLTVITNTKCAQTYGTS-----VVTDSTLCVA-TTDAKSTCNGDSGGPL- 227

  Fly   387 ALLPEYNCVAFVVGITSFGKFCAAPNA-PGVYTRLYSYLDWIE 428
                .....:..:|:||||........ |..:||:.||||||:
  Fly   228 ----VLKSSSEQIGLTSFGASAGCEKGYPAAFTRVTSYLDWIK 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 78/262 (30%)
Jon65AivNP_648012.1 Tryp_SPc 37..265 CDD:214473 76/268 (28%)
Blue background indicates that the domain is not in the aligned region.

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