DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Jon65Aiv

DIOPT Version :9

Sequence 1:NP_001097766.1 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_648012.1 Gene:Jon65Aiv / 38682 FlyBaseID:FBgn0250815 Length:271 Species:Drosophila melanogaster


Alignment Length:303 Identity:85/303 - (28%)
Similarity:129/303 - (42%) Gaps:61/303 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 VLAQRISATKCQEYNAAARRLHLTDTGRTFSGKQCVPSVPLIVGGTPTRHGLFPHMAALGWTQGS 209
            :||..::|:...|.....|...:...| ...|:        |.||:....|.||:...|.....:
  Fly     6 ILALAVAASAFPEPELRHRSREMPVVG-DIGGR--------ITGGSNAAVGQFPYQVGLSLKLSA 61

  Fly   210 GSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLGARQLNETSATQQDIKILI----IV 270
            .|.    .| |||:|:...:||||||| |.|.:.. .|.|||     |..|..:|...:    |:
  Fly    62 LSS----AW-CGGSLIGSTWVLTAAHC-TDGVQSV-TVYLGA-----TVRTSAEITHTVSSSDII 114

  Fly   271 LHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPTV------------VAAGWGRT 323
            :|..:.|:...:||:|:|:......|         ::..:::|::            ||:|||||
  Fly   115 IHSGWNSANLRNDISLIKIPATSSSS---------RISAVKLPSISNSYSTFVGDVAVASGWGRT 170

  Fly   324 E--FLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIH 386
            .  ..|..:| |:.|||.|:....|.|.|...     .:.:...|.. ....:.||.||||||: 
  Fly   171 SDTSSGVATN-LQYVDLTVITNTKCAQTYGTS-----VVTDSTLCVA-TTDAKSTCNGDSGGPL- 227

  Fly   387 ALLPEYNCVAFVVGITSFGKFCAAPNA-PGVYTRLYSYLDWIE 428
                .....:..:|:||||........ |..:||:.||||||:
  Fly   228 ----VLKSSSEQIGLTSFGASAGCEKGYPAAFTRVTSYLDWIK 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_001097766.1 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 78/262 (30%)
Tryp_SPc 186..427 CDD:214473 76/259 (29%)
Jon65AivNP_648012.1 Tryp_SPc 37..265 CDD:214473 76/268 (28%)
Tryp_SPc 38..268 CDD:238113 78/262 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437036
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
43.940

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