DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG32271

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_728833.1 Gene:CG32271 / 38392 FlyBaseID:FBgn0052271 Length:248 Species:Drosophila melanogaster


Alignment Length:247 Identity:80/247 - (32%)
Similarity:116/247 - (46%) Gaps:30/247 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250
            ||||.|......|::..|   :..|:      :.|||:||:..:|:|||||.........:|..|
  Fly    25 IVGGVPVDIASVPYLVNL---RIGGN------FMCGGSLVTPQHVVTAAHCVKGIGASRILVVAG 80

  Fly   251 ARQLNETSATQQDIKILIIVLHPK-YRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPT 314
            ..:|.||.......|    |..|| |.:.....|:|:|||...:. ..:|....|..........
  Fly    81 VTRLTETGVRSGVDK----VYTPKAYNTRTLTSDVAVLKLKAPIS-GPKVSTIELCNTSFKAGDL 140

  Fly   315 VVAAGWGR-TEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEG-QFCAGYLPGGRDTC 377
            :..:|||: ||...|.|..:|.||:.::|:..|...|:.     ||.|.. .|||. :||.:|.|
  Fly   141 IKVSGWGQITERNKAVSMQVRSVDVALIPRKACMSQYKL-----RGTITNTMFCAS-VPGVKDAC 199

  Fly   378 QGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEK 429
            :||||||  |:.....|     ||.|:|..||..::|||||.:.:...:|:|
  Fly   200 EGDSGGP--AVYQGQLC-----GIVSWGVGCARKSSPGVYTNVKTVRSFIDK 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 80/247 (32%)
CG32271NP_728833.1 Tryp_SPc 24..242 CDD:214473 78/243 (32%)
Blue background indicates that the domain is not in the aligned region.

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