DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG3650

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_611971.1 Gene:CG3650 / 37974 FlyBaseID:FBgn0035070 Length:249 Species:Drosophila melanogaster


Alignment Length:254 Identity:71/254 - (27%)
Similarity:117/254 - (46%) Gaps:44/254 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 PLIVGGTPTRHGLFPHMAALGWTQGSG---SKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPD 245
            |.|||||.|.      ::|:|     |   :...|..:.|||:||:..:|:|||||.........
  Fly    24 PRIVGGTTTT------LSAVG-----GFVVNLRYDGTFYCGGSLVTSSHVVTAAHCLKGYQASRI 77

  Fly   246 MVRLGARQLNETSATQQDIKILIIVLHPK-YRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPE 309
            .|:.|..:|:::...::..:..|    |. :.||:...|:.:::|...:..|.      :..:|.
  Fly    78 TVQGGVSKLSQSGVVRRVARYFI----PNGFSSSSLNWDVGVIRLQSALTGSG------ITTIPL 132

  Fly   310 LQIP-----TVVAAGWGRTEF-LGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAG 368
            .|:.     .:..:|||.|.: ..:.||.||.|.:.::.:..|::.|:....|    ....||| 
  Fly   133 CQVQWNPGNYMRVSGWGTTRYGNSSPSNQLRTVRIQLIRKKVCQRAYQGRDTL----TASTFCA- 192

  Fly   369 YLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
             ..||:|:|.|||||.:  :.....|     ||.|:|..||....|||||.::....:|
  Fly   193 -RTGGKDSCSGDSGGGV--IFKNQLC-----GIVSWGLGCANAQYPGVYTSVHRVRSFI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 70/252 (28%)
CG3650NP_611971.1 Tryp_SPc 25..243 CDD:214473 69/251 (27%)
Blue background indicates that the domain is not in the aligned region.

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