DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG15873

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_611910.2 Gene:CG15873 / 37898 FlyBaseID:FBgn0035003 Length:297 Species:Drosophila melanogaster


Alignment Length:261 Identity:72/261 - (27%)
Similarity:109/261 - (41%) Gaps:46/261 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 LIVGG-TPTRHGLFPHMAAL---GWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCAT---SGSK 242
            ||.|| .|..:.|..|:.::   .:.:..|...     .|.|.|||...|||||||.|   ..|.
  Fly    35 LISGGYKPKSNRLSRHVVSIRTKNYVRHRGDNH-----FCSGVLVSSRAVLTAAHCLTDRYKASM 94

  Fly   243 PPDMVRLGARQLNETSA-TQQDIK-ILIIVLHPKYRSSAYY--HDIALLKLTRRVKFS-EQVRPA 302
            .|..:|:....:...:. .:.|.: :..:|:||:|..   |  :|:|:|:|:.||:.| ..|.|.
  Fly    95 NPRGIRVVFGHITRLAVYDESDFRSVDRLVVHPEYER---YKKNDLAILRLSERVQSSNHDVLPL 156

  Fly   303 CLWQLPELQI-PTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFC 366
            .:.:...:.. .|.:..|||:....|..||.|..:|:.:.|...|::.|            ..|.
  Fly   157 LMRKTANVTYGDTCITLGWGQIYQHGPYSNELVYLDVILRPPSLCQKHY------------DTFT 209

  Fly   367 AGY----LPGGRD-TCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDW 426
            |.:    .|.|.. .|.||.|||:       .|...:.|:......||...|....:.|| |.||
  Fly   210 ADHNVCTEPVGESMNCAGDMGGPL-------LCKGALFGLIGGHMGCAGGKAMKFLSFLY-YKDW 266

  Fly   427 I 427
            |
  Fly   267 I 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 71/260 (27%)
CG15873NP_611910.2 Tryp_SPc 59..250 CDD:238113 56/217 (26%)
Blue background indicates that the domain is not in the aligned region.

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