DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG3700

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_611736.1 Gene:CG3700 / 37640 FlyBaseID:FBgn0034796 Length:360 Species:Drosophila melanogaster


Alignment Length:366 Identity:122/366 - (33%)
Similarity:172/366 - (46%) Gaps:54/366 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 FCRRSFDGRSGYC--ILAYQCLHVIREYRVHGTRIDICTHRNNVPVICCPLADKHVLAQRISATK 154
            :|    |..:|.|  :....|..:.....:.|..:..|...|:  ::|||:...|...:....|:
  Fly    22 YC----DNGTGECKELTPSDCPVIFYNQHLIGAEVKYCDEFND--IVCCPIPLDHQNLKPAEQTR 80

  Fly   155 -----CQEYNAAARRLHLTDTGRTFSGKQCVPSVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQ 214
                 |::||..               :....|.|.|||||......||.||.:|..:.:.|| .
  Fly    81 PFEKQCKQYNEV---------------RSACQSTPFIVGGTKASGKEFPFMALIGTHRPNKSK-S 129

  Fly   215 DIKWGCGGALVSELYVLTAAHC-ATSGSK----------PPDMVRLGARQLNETS--ATQQDIKI 266
            ||.|.|||::|...:||||||| .|..||          |..:||||....|.|:  |..||.::
  Fly   130 DINWDCGGSVVHPKFVLTAAHCLETDESKAERLDPNFDSPKFVVRLGELDYNSTTDDALVQDFRV 194

  Fly   267 LIIVLHPKY----RSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPTVVAAGWGRTEFLG 327
            :..|:||.|    ....:.:||||::|.|:.:|::.|...||.......:..|.|||||.|.. |
  Fly   195 VNYVVHPGYDTEDEEQGFKNDIALVELDRKAEFNDHVAAVCLPPDSGNDVQQVTAAGWGFTAD-G 258

  Fly   328 AKSNALRQVDLDVVPQMTCKQIYRKERRLPRGI-IEGQFCAGYLPGGRDTCQGDSGGPIHALLPE 391
            .||:.|.:|:|.......|      ::||...| ...|||||.:....|||.|||||||....|.
  Fly   259 VKSSHLLKVNLQRFSDEVC------QKRLRFSIDTRTQFCAGSMSSQADTCNGDSGGPIFVQHPL 317

  Fly   392 YNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEKIAF 432
            |.|:..|:||.|:|..|.:...|.|||:::.|.||||.|.:
  Fly   318 YPCLKQVIGIVSYGLVCGSQGLPSVYTKVHLYTDWIESIVW 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829 9/47 (19%)
Tryp_SPc 186..430 CDD:238113 103/261 (39%)
CG3700NP_611736.1 Tryp_SPc 102..356 CDD:238113 103/261 (39%)

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