DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG9294

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_995920.1 Gene:CG9294 / 37491 FlyBaseID:FBgn0034666 Length:352 Species:Drosophila melanogaster


Alignment Length:297 Identity:97/297 - (32%)
Similarity:142/297 - (47%) Gaps:45/297 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 NAAARRLHLTD--TGRTFSGKQCVPSVPL-----------------IVGGTPTRHGLFPHMAALG 204
            :...||...|.  |.||.:.:..|.:.|:                 ||||..||...:|.||.:.
  Fly    55 STTTRRTTTTSSTTSRTTTSRTTVANFPIERDCVTCRCGLINTLYKIVGGQETRVHQYPWMAVIL 119

  Fly   205 WTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLGARQLNETSATQQDIKILII 269
            ...         ::.|.|:|:::|||||||||..  ..||:::.|...:.|. |.:..||.|...
  Fly   120 IYN---------RFYCSGSLINDLYVLTAAHCVE--GVPPELITLRFLEHNR-SHSNDDIVIQRY 172

  Fly   270 V----LHPKYRSSAYYHDIALLKLTRRVKF-SEQVRPACL-WQLPELQIPTVVAAGWGRTEFLGA 328
            |    :|..|...::.:|:|:|:|.:.:.. ..::||.|| .|.........:.||||.....|.
  Fly   173 VSRVKVHELYNPRSFDNDLAVLRLNQPLDMRHHRLRPICLPVQSYSFDHELGIVAGWGAQREGGF 237

  Fly   329 KSNALRQVDLDVVPQMTCKQ--IYRKERRLPRGIIEGQFCAGYL-PGGRDTCQGDSGGPIHALLP 390
            .::.||:||:.|:||..|:.  .||     |..|.:...||||: .||:|.|.||||||:.....
  Fly   238 GTDTLREVDVVVLPQSECRNGTTYR-----PGQITDNMMCAGYISEGGKDACSGDSGGPLQTTFD 297

  Fly   391 EYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
            |......:.||.|:|..||.|.:||||||:..||.|:
  Fly   298 EQPGQYQLAGIVSWGVGCARPQSPGVYTRVNQYLRWL 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 89/251 (35%)
CG9294NP_995920.1 Tryp_SPc 101..334 CDD:238113 88/249 (35%)
Blue background indicates that the domain is not in the aligned region.

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