DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and etaTry

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_523692.1 Gene:etaTry / 36217 FlyBaseID:FBgn0011554 Length:262 Species:Drosophila melanogaster


Alignment Length:250 Identity:78/250 - (31%)
Similarity:116/250 - (46%) Gaps:27/250 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250
            ||||..|......::..|.....|.|.....   |||.::..:.:.|||||..:......:|..|
  Fly    28 IVGGADTSSYYTKYVVQLRRRSSSSSSYAQT---CGGCILDAVTIATAAHCVYNREAENFLVVAG 89

  Fly   251 ARQLNETSATQQDIKILI--IVLHPKYRSSAYYHDIALLKLTRRV---KFSEQVRPACLWQLPEL 310
                :::......:.:.:  ::.|..|.||...:||||:.:...:   .||.........:.|.:
  Fly    90 ----DDSRGGMNGVVVRVSKLIPHELYNSSTMDNDIALVVVDPPLPLDSFSTMEAIEIASEQPAV 150

  Fly   311 QIPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRD 375
            .:...: :|||.|:..|..|:.|:||.:.:|....|::.|     ..|.|.||..|||...||:|
  Fly   151 GVQATI-SGWGYTKENGLSSDQLQQVKVPIVDSEKCQEAY-----YWRPISEGMLCAGLSEGGKD 209

  Fly   376 TCQGDSGGPIHALLPEYNCVA-FVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEK 429
            .||||||||:        .|| .:.||.|:|:.||.||.||||..:..|.|||.|
  Fly   210 ACQGDSGGPL--------VVANKLAGIVSWGEGCARPNYPGVYANVAYYKDWIAK 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 77/249 (31%)
etaTryNP_523692.1 Tryp_SPc 27..254 CDD:214473 75/246 (30%)
Blue background indicates that the domain is not in the aligned region.

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