DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and kappaTry

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_610674.5 Gene:kappaTry / 36215 FlyBaseID:FBgn0043471 Length:263 Species:Drosophila melanogaster


Alignment Length:286 Identity:83/286 - (29%)
Similarity:122/286 - (42%) Gaps:67/286 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 CVPSVPLIVG--------GTP------------TRHGLFPHMAALGWTQGSGSKDQDIKWGCGGA 223
            |:|.:.|.:|        |.|            .||   |::.:|.:.:   ..:......|.|.
  Fly     2 CIPLLLLAIGFSSVISISGQPEGRIINGTTVDIARH---PYLVSLRYRR---DNESSYMHECAGV 60

  Fly   224 LVSELYVLTAAHCATSGSKPPDMVRL-GARQLNETSATQQDIKILIIVL----HPKYRSSAYYHD 283
            ::||..::|:|.|.....:...:|.: ||...|.|..      .:..|.    ||.|......:|
  Fly    61 IISEQALITSAQCLYGLPEETKLVAVAGANTRNGTDG------FIYPVANWTHHPNYDPVTVDND 119

  Fly   284 IALLKLTRRVKF------SEQVRPACLWQLPEL-QIPTVVAAGWGRTEFLGAKSNALRQVDLDVV 341
            |.:|.|...:..      |..:||    :.|.: ::.||  ||||..|..|..|..|.|.::.||
  Fly   120 IGVLLLDTTLDLTLLGISSIGIRP----ERPAVGRLATV--AGWGYREEWGPSSYKLEQTEVPVV 178

  Fly   342 PQMTCKQIYRKERRLPRGIIEGQFCAGY-LPGGRDTCQGDSGGP--IHALLPEYNCVAFVVGITS 403
            ....|.|||....     :.|...|||: :.||.|.||||:|||  |...|         ||:.|
  Fly   179 SSEQCTQIYGAGE-----VTERMICAGFVVQGGSDACQGDTGGPLVIDGQL---------VGLVS 229

  Fly   404 FGKFCAAPNAPGVYTRLYSYLDWIEK 429
            :|:.||.||.|.||..:.|::||||:
  Fly   230 WGRGCARPNYPTVYCYVASFVDWIEE 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 80/279 (29%)
kappaTryNP_610674.5 Tryp_SPc 26..256 CDD:238113 77/262 (29%)
Blue background indicates that the domain is not in the aligned region.

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