DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snk and TMPRSS9

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001382442.1 Gene:TMPRSS9 / 360200 HGNCID:30079 Length:1093 Species:Homo sapiens


Alignment Length:461 Identity:120/461 - (26%)
Similarity:192/461 - (41%) Gaps:97/461 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ILWSLIVHLQLTCLHLILQTPNLEAL-------DALE-------IINYQTTKYTIPEVWK----E 49
            |.|:..:..:.:..|..| ||.||||       ..||       ::||:....::...::    .
Human    66 IRWTSSLRRETSDYHRTL-TPTLEALFVSSFQKTELEASCVGCSVLNYRDGNSSVLVHFQLHFLL 129

  Fly    50 QPVATIGEDVDDQDTEDEESYLKFGDDAEVR----------TSVS---EGLHEGAFCRRSFDGRS 101
            :|:.|:...:       ||..|:.|..|.:|          |.||   .|.|:|....|.|  :|
Human   130 RPLQTLSLGL-------EEELLQRGIRARLREHGISLAAYGTIVSAELTGRHKGPLAERDF--KS 185

  Fly   102 GYCILAYQCLHVIREYRVHGTRIDICTHRNNVPVICCPLADKHVLAQRISATKCQEYNAAARRLH 166
            |.|               .|.... |.:...|..:.....|:...:.......|:.....|.|: 
Human   186 GRC---------------PGNSFS-CGNSQCVTKVNPECDDQEDCSDGSDEAHCECGLQPAWRM- 233

  Fly   167 LTDTGRTFSGKQCVPSVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVL 231
               .||             ||||.....|.||..|:|         .::.:..||.|:::..:::
Human   234 ---AGR-------------IVGGMEASPGEFPWQASL---------RENKEHFCGAAIINARWLV 273

  Fly   232 TAAHCATSGSKPPDMVR-LGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKF 295
            :||||......|...|. :||..|:.:.|:....:::.||.||.|.:.....|:|:|:||..:.|
Human   274 SAAHCFNEFQDPTKWVAYVGATYLSGSEASTVRAQVVQIVKHPLYNADTADFDVAVLELTSPLPF 338

  Fly   296 SEQVRPACLWQLPELQIPT--VVAAGWG--RTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRL 356
            ...::|.||.....:..|:  .:.:|||  :.:|| .|...|::..::::.|..|..:|      
Human   339 GRHIQPVCLPAATHIFPPSKKCLISGWGYLKEDFL-VKPEVLQKATVELLDQALCASLY------ 396

  Fly   357 PRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLY 421
            ...:.:...|||||.|..|:||||||||:  :..|.:...|:.||.|:|..||....||||.|:.
Human   397 GHSLTDRMVCAGYLDGKVDSCQGDSGGPL--VCEEPSGRFFLAGIVSWGIGCAEARRPGVYARVT 459

  Fly   422 SYLDWI 427
            ...|||
Human   460 RLRDWI 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829 8/45 (18%)
Tryp_SPc 186..430 CDD:238113 78/247 (32%)
TMPRSS9NP_001382442.1 SEA 66..>127 CDD:460188 14/61 (23%)
LDLa 188..223 CDD:238060 5/50 (10%)
Tryp_SPc 236..465 CDD:214473 77/259 (30%)
Tryp_SPc 538..768 CDD:238113
Pneumo_att_G <717..>867 CDD:114270
Tryp_SPc 861..1087 CDD:238113
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.