DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG1773

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_610512.1 Gene:CG1773 / 35999 FlyBaseID:FBgn0033439 Length:317 Species:Drosophila melanogaster


Alignment Length:234 Identity:69/234 - (29%)
Similarity:106/234 - (45%) Gaps:48/234 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 CGGALVSELYVLTAAHCATSGSKPPDM-VRLGARQLNETS----ATQQDIKILII--------VL 271
            |||:|:|||:|||||||.....:..:: |.||...::.||    ...|.:..|.:        :|
  Fly    90 CGGSLLSELFVLTAAHCFKMCPRSKEIRVWLGELDISSTSDCVTYNYQRVCALPVEEFTIDKWIL 154

  Fly   272 HPKYRSSAYY--HDIALLKLTRRVKFSEQVRPACLWQLPELQIPTV------VAAGWGRTEFLGA 328
            |.::  :.:|  :||||:||.::|.|.:.:||.||....||...|:      :|.||||||....
  Fly   155 HEEF--NLFYPGYDIALIKLNKKVVFKDHIRPICLPLTDELLAFTLQLGQSYMAVGWGRTESRRF 217

  Fly   329 KSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAG--YLPGGRDTCQGDSGGPI---HAL 388
            .::.:              :::....:...|......||.  |:    |||.||||||:   ..|
  Fly   218 ANSTM--------------EVHINTEKCTDGRDTSFLCANGDYV----DTCTGDSGGPLIWKTTL 264

  Fly   389 LPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
            ..:...|.|  |:.|.|...........|..:.:|:.||
  Fly   265 FGKARTVQF--GVVSTGSQNCGAGQKAYYMDVPTYVPWI 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 69/234 (29%)
CG1773NP_610512.1 Tryp_SPc 61..301 CDD:214473 67/232 (29%)
Blue background indicates that the domain is not in the aligned region.

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