DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Jon44E

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_724699.1 Gene:Jon44E / 35853 FlyBaseID:FBgn0001285 Length:271 Species:Drosophila melanogaster


Alignment Length:261 Identity:76/261 - (29%)
Similarity:118/261 - (45%) Gaps:57/261 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250
            |..|.|...|..|::..|.:..|.        :.|||:::...:|||||||..|.:..  ::..|
  Fly    41 ITNGYPAYEGKIPYIVGLSFNDGG--------YWCGGSIIDHTWVLTAAHCTNSANHV--LIYFG 95

  Fly   251 ARQLNETSAT----QQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQL-PEL 310
            |...:|...|    :.|     ::.||.: :....:||||:::. .|.|         |.| .::
  Fly    96 ASFRHEAQYTHWVSRSD-----MIQHPDW-NDFLNNDIALIRIP-HVDF---------WSLVNKV 144

  Fly   311 QIPT------------VVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEG 363
            ::|:            .||:|||.|:.....||.|..||:.::....|:..|....     |.:.
  Fly   145 ELPSYNDRYNSYSGWWAVASGWGLTDNNSGMSNYLNCVDVQIIDNNDCRNYYGSNY-----ITDN 204

  Fly   364 QFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSF--GKFCAAPNAPGVYTRLYSYLDW 426
            ..|.. ..||:.:|.||||||:  :|.:.|   .:|||.||  |:.|.| ..|..:||:..||||
  Fly   205 TICIN-TDGGKSSCSGDSGGPL--VLHDNN---RIVGIVSFGSGEGCTA-GRPAGFTRVTGYLDW 262

  Fly   427 I 427
            |
  Fly   263 I 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 76/261 (29%)
Jon44ENP_724699.1 Tryp_SPc 41..266 CDD:238113 76/261 (29%)
Blue background indicates that the domain is not in the aligned region.

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