DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Jon25Bi

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001033873.1 Gene:Jon25Bi / 33708 FlyBaseID:FBgn0020906 Length:266 Species:Drosophila melanogaster


Alignment Length:319 Identity:83/319 - (26%)
Similarity:132/319 - (41%) Gaps:103/319 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 VLAQRISATKCQEYNAAARRLHLTDTGR--TFSGKQCVPSVPLIVGGTPTRHGLFPHMAALGWTQ 207
            |||..::|...:    ..:::|..|..:  ..:|:        ||.|.|...|..|:...||::.
  Fly     6 VLALALAAVSAE----TVQQVHPKDLPKDTKINGR--------IVNGYPAYEGKAPYTVGLGFSG 58

  Fly   208 GSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLGARQLNETSATQQDIKILIIVLH 272
            ..|       |.|||::::..:|||||||..           ||.|:.             |...
  Fly    59 NGG-------WWCGGSIIAHDWVLTAAHCTN-----------GASQVT-------------IYYG 92

  Fly   273 PKYRSSAYY--------------------HDIALLKLTRRVKFSEQVRPACLWQLPELQIPT--- 314
            ..:|::|.:                    :||||:: |..|.|...|.        ::::|:   
  Fly    93 ATWRTNAQFTHTVGSGDFIQNHNWPNQNGNDIALIR-TPHVDFWHMVN--------KVELPSFND 148

  Fly   315 ---------VVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYL 370
                     .||.|||.|. .|::.:.:..|||.::....|.:.|..:   |.||:    |.. .
  Fly   149 RYNMYDNYWAVACGWGLTT-AGSQPDWMECVDLQIISNSECSRTYGTQ---PDGIL----CVS-T 204

  Fly   371 PGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSF--GKFCAAPNAPGVYTRLYSYLDWI 427
            .||:.||.||||||:  :|.:   ...:||:||:  |..|.| ..|..:||:.:.||||
  Fly   205 SGGKSTCSGDSGGPL--VLHD---GGRLVGVTSWVSGNGCTA-GLPSGFTRVTNQLDWI 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 76/276 (28%)
Jon25BiNP_001033873.1 Tryp_SPc 36..257 CDD:214473 74/283 (26%)
Blue background indicates that the domain is not in the aligned region.

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