DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Jon25Bii

DIOPT Version :9

Sequence 1:NP_001097766.1 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001285608.1 Gene:Jon25Bii / 33707 FlyBaseID:FBgn0031654 Length:276 Species:Drosophila melanogaster


Alignment Length:262 Identity:75/262 - (28%)
Similarity:117/262 - (44%) Gaps:56/262 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMV--- 247
            |..|.|...|..|::..||::..||.      |.|||:::...:|:||||| |.|:....:.   
  Fly    43 ITNGYPAYEGKVPYIVGLGFSSDSGG------WWCGGSIIGHTWVITAAHC-THGAHSVTIYYGA 100

  Fly   248 --RLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQL-PE 309
              ||.|:..:...:..       ...|..|.::...:||:|:. |..|.|         |.| .:
  Fly   101 LWRLQAQYTHTVGSGH-------FRQHSDYNTNNLNNDISLIN-TPHVDF---------WHLINK 148

  Fly   310 LQIPT------------VVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIE 362
            :::|.            .:|:||||.......|:.|..||..::.:..|..:|..:     .|.:
  Fly   149 VELPDGNERHDSFAGWWALASGWGRPCDSCGVSDYLNCVDSQIITRDECSSVYGTD-----VITD 208

  Fly   363 GQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSF--GKFCAAPNAPGVYTRLYSYLD 425
            ...|.. .|||:.||.||||||:  :|.:.   :.:||:|||  ...|.: ..|..:||:.||||
  Fly   209 NVICTS-TPGGKSTCAGDSGGPL--VLHDR---SKLVGVTSFVAASGCTS-GLPDGFTRVTSYLD 266

  Fly   426 WI 427
            ||
  Fly   267 WI 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_001097766.1 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 75/262 (29%)
Tryp_SPc 186..427 CDD:214473 73/260 (28%)
Jon25BiiNP_001285608.1 Tryp_SPc 42..268 CDD:214473 73/260 (28%)
Tryp_SPc 43..271 CDD:238113 75/262 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45436968
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
33.030

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