DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Np

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_061514435.1 Gene:Np / 3291870 VectorBaseID:AGAMI1_007541 Length:1276 Species:Anopheles gambiae


Alignment Length:268 Identity:89/268 - (33%)
Similarity:135/268 - (50%) Gaps:24/268 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 RTFSGKQCVPSVPLIVGGTPTRHGLFPHMAAL-GWTQGSGSKDQDIKWGCGGALVSELYVLTAAH 235
            |:..||:..|. |.|||||....|.:|...:| .|      :.......||.||::|.:.:||||
Mosquito  1021 RSVCGKRMFPE-PRIVGGTKAAFGRWPWQISLRQW------RTSTYLHKCGAALLNENWAITAAH 1078

  Fly   236 CATSGSKPPD--MVRLGARQ--LNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFS 296
            |.  .:.||.  ::|||...  |.|.....|:.::.|:..||::....:.:|:|||:....|.|.
Mosquito  1079 CV--DNVPPSDLLLRLGEYDLALEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVVFQ 1141

  Fly   297 EQVRPACLWQLPELQI-PTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKE---RRLP 357
            ..:.|.|:.:..|..| .|....||||....|...:.|::|.:.|:....|:.:||..   ..:|
Mosquito  1142 PNIIPVCVPENDENFIGRTAFVTGWGRLYEDGPLPSVLQEVTVPVIENKICETMYRSAGYIEHIP 1206

  Fly   358 RGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYS 422
            ...|    |||:..||.|:|:||||||:  ::...:....:.|:.|:|..||.||.||||||:..
Mosquito  1207 HIFI----CAGWKKGGYDSCEGDSGGPM--VIQRTDKRFLLAGVISWGIGCAEPNQPGVYTRISE 1265

  Fly   423 YLDWIEKI 430
            :.|||.:|
Mosquito  1266 FRDWINQI 1273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 83/252 (33%)
NpXP_061514435.1 None
Blue background indicates that the domain is not in the aligned region.

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