DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC3290023

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_556332.4 Gene:LOC3290023 / 3290023 VectorBaseID:AGAMI1_005833 Length:297 Species:Anopheles gambiae


Alignment Length:283 Identity:73/283 - (25%)
Similarity:115/283 - (40%) Gaps:61/283 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 TDTGRTFSGKQCVPSVPLIVGGTPTRHGLFPHMAA--LGWTQGSGSKDQDIKWGCGGALVSELYV 230
            |.|.|..:|::.:|             |.||:..|  |.:..|:..        |||::::..::
Mosquito    52 TSTDRVVNGQEALP-------------GQFPYQVALLLNFPDGTAL--------CGGSVLTRNFI 95

  Fly   231 LTAAHCATSGSK---PPDMVRLGARQLNETSATQQDIKILI--IVLHPKYRSSAYYHDIALLKLT 290
            ||||||.::.|.   ...:..:||........:||.|:...  |..||:|..::..:|:||:.|.
Mosquito    96 LTAAHCVSATSTTLVSGGIAIMGAHNRTAMELSQQRIRFTSTGIRRHPEYDDTSLRNDVALILLN 160

  Fly   291 RRVKFSEQVRPACLWQLPELQIPTVVAAGWGRTE------FLGAKSNALRQVDLDVVP----QMT 345
            ..:.|:.:|:|        :.:|       .||:      |.|..|...|..|....|    :.|
Mosquito   161 SPMTFTSRVKP--------ISLP-------ARTDTRQFEGFTGTVSGFGRSSDASPYPSSILRFT 210

  Fly   346 CKQIYRKERRLPR---GIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFG-K 406
            ...|..|...:..   .:.:.|.......|||.:|.||||||    |...:.....:|..||| .
Mosquito   211 SNPIMSKAECIVSWGFALAQSQNVCLKPTGGRSSCNGDSGGP----LTVNSGGVLQIGTVSFGSS 271

  Fly   407 FCAAPNAPGVYTRLYSYLDWIEK 429
            :..|...|.||.|:...|.||.:
Mosquito   272 YGCASGWPSVYARVSYVLSWINE 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 68/265 (26%)
LOC3290023XP_556332.4 None
Blue background indicates that the domain is not in the aligned region.

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