DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and psh

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster


Alignment Length:392 Identity:125/392 - (31%)
Similarity:187/392 - (47%) Gaps:60/392 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 TSVSEGLHEGAFCRRSFDGRSGYCILAYQCLHVIREYRVHGTRIDICTHRNNVP---------VI 136
            :||...:..|..|:.: |...|.|..:..|..:|..|...|    :.| .|:||         :.
  Fly    18 SSVEAAVTVGRACKVT-DTMPGICRTSSDCEPLIDGYIKSG----VLT-LNDVPSCGLGAWGEIF 76

  Fly   137 CCPLA----DKHVLAQRISATKCQEYNAAARRLHLTDTG-----------------RTFSGKQCV 180
            |||..    :..:.:...|:|...:....:.|:.:...|                 :..||.|.|
  Fly    77 CCPTKPCCDNSTITSVSTSSTTSTKAPMTSGRVDVPTFGSGDRPAVAACKKIRERKQQRSGNQLV 141

  Fly   181 PSVPLIVGGTPTRHGLFPHMAALGW-TQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPP 244
            ..   ||||.|...|::|||||:|: |.|:..:       |||:|::..:|||||||..:.:..|
  Fly   142 IH---IVGGYPVDPGVYPHMAAIGYITFGTDFR-------CGGSLIASRFVLTAAHCVNTDANTP 196

  Fly   245 DMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPE 309
            ..|||||..:.....:.|||.|..:.:||:|..:. |:|||:|:|.|.|..::.:||||| ....
  Fly   197 AFVRLGAVNIENPDHSYQDIVIRSVKIHPQYVGNK-YNDIAILELERDVVETDNIRPACL-HTDA 259

  Fly   310 LQIPT---VVAAGWGRTEF-LGAKSNALRQVDLDVVPQMTCKQIYRKE----RRLPRGIIEGQFC 366
            ...|:   ...||||.... ..|:|..|.:..|::||...|...|.::    |.|.:|:|:...|
  Fly   260 TDPPSNSKFFVAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLC 324

  Fly   367 AGYLPGGRDTCQGDSGGP-IHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEKI 430
            |.......|.|:|||||| ||.|..| :.:..::|:.|.|..||.. .||:|||:.||||:||.|
  Fly   325 AIDQKLIADACKGDSGGPLIHELNVE-DGMYTIMGVISSGFGCATV-TPGLYTRVSSYLDFIEGI 387

  Fly   431 AF 432
            .:
  Fly   388 VW 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829 13/54 (24%)
Tryp_SPc 186..430 CDD:238113 98/253 (39%)
pshNP_573297.1 CLIP 30..79 CDD:197829 13/54 (24%)
Tryp_SPc 144..387 CDD:238113 98/253 (39%)

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