DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG33160

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_788456.1 Gene:CG33160 / 326265 FlyBaseID:FBgn0053160 Length:258 Species:Drosophila melanogaster


Alignment Length:261 Identity:71/261 - (27%)
Similarity:118/261 - (45%) Gaps:44/261 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 PLIVGGTPTRHGLFPHMAALG----WTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPP 244
            |.|:||         |::::.    ..|.:.|::.     |||:||...:|:|||||..:.:|..
  Fly    32 PRIIGG---------HVSSIKEEKYLVQVTTSEEL-----CGGSLVKPRWVITAAHCVYNKNKND 82

  Fly   245 DMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKL-TRRVKFSEQVRPACLWQLP 308
            ..:..||.  |:.........:..|.:.|.:.......|:|.|:| :..:..:.:..|.....:|
  Fly    83 FKIYGGAS--NQAGPYAVIRTVDYIAIRPDFNRKTLNMDVAALRLNSDMIGANIETIPLAAQSVP 145

  Fly   309 ELQIPTVVAAGWGRTEFLGA-KSNALRQVDLDVVP---QMTCKQIYRKERRLPRGIIEGQFCAGY 369
            ...:  |..:|||   ||.| .:....:|...:||   :.:|...:|...|:.|.::    ||..
  Fly   146 ARAL--VKVSGWG---FLTADATKTAERVHSVLVPMWSRASCVSAFRGIHRITRSMV----CAAR 201

  Fly   370 LPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEKIAFKQ 434
            | ..:|:|.||||||:     .|.  ..:.||.|||..||:. .||:||.:....||.:::. :|
  Fly   202 L-YKKDSCDGDSGGPL-----VYR--GQLAGIVSFGYGCASA-LPGIYTSVPEIRDWFQRVV-EQ 256

  Fly   435 H 435
            |
  Fly   257 H 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 68/252 (27%)
CG33160NP_788456.1 Tryp_SPc 33..249 CDD:214473 66/249 (27%)
Blue background indicates that the domain is not in the aligned region.

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