DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and plg

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_958880.2 Gene:plg / 322691 ZFINID:ZDB-GENE-030131-1411 Length:818 Species:Danio rerio


Alignment Length:484 Identity:120/484 - (24%)
Similarity:181/484 - (37%) Gaps:139/484 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 EQPVATIGEDVDDQDTEDEESYLK---FGDDAEVRTSVSEGLHEGA------------FCRRSFD 98
            |:||...||:..:.|.......:.   .|...:..||:....|...            .||....
Zfish   366 EEPVIPQGEECYEGDGSSYRGVMSETISGKKCQFWTSMEPHRHSKTPQNFPKADLRRNLCRNPDG 430

  Fly    99 GRSGYCILAYQCLHVIR-EYRVHGTRIDICTHRNNV------PVICCP--------LADKHVLAQ 148
            .|:.:|   |.....:| ||    ..|:.|.:|.|:      |....|        ..|:...::
Zfish   431 DRAPWC---YTTDPTVRWEY----CNIERCDNRPNIQEPPAKPAATTPTQSTPAQSTPDQSAPSE 488

  Fly   149 R-----------------ISATKCQEYNAAARRLHLTDTGRTFSGK-----QC------------ 179
            :                 :....||.:.:.....|.:.|..|...|     ||            
Zfish   489 KDCKNGNGAEYRGSTSMTVMGVTCQAWRSMTPHQHASFTPETHPDKGLESNQCRNPDSDVNGPWC 553

  Fly   180 ---VPS-------VP-------------------LIVGGTPTRHGLFPHMAALGWTQGSGSKDQD 215
               .||       :|                   .||||..::...:|...:|. |:|.      
Zfish   554 YTTDPSKKWDYCQIPDCESLKCGQPATKPKRCFGRIVGGCVSKPHSWPWQISLR-TRGK------ 611

  Fly   216 IKWGCGGALVSELYVLTAAHCATSGSKPPD-MVRLGARQLNETSATQQDIKILIIVLHPKYRSSA 279
            |.: |||.|:...:|:|||||......|.. .:.||......|.:::|:..:..|:..|...   
Zfish   612 IHF-CGGTLIDPQWVVTAAHCLERSDSPSAYKIMLGIHTERATESSKQERDVTKIIKGPAGT--- 672

  Fly   280 YYHDIALLKLTRRVKFSEQVRPACLWQLPELQ--IPT---VVAAGWGRTEFLGAKSNALRQVDLD 339
               |||||||.|....:::|.|.|   |||..  :|:   ....|||.|:..|.: ..|::....
Zfish   673 ---DIALLKLDRPALINDKVSPVC---LPEKDYIVPSNTECYVTGWGETQDTGGE-GYLKETGFP 730

  Fly   340 VVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVA---FVV-G 400
            |:....|    .:...|...:.:.:.|||.:.||.|:||||||||:       .|.|   ||: |
Zfish   731 VIENKVC----NRPSFLNGRVKDHEMCAGNIEGGNDSCQGDSGGPL-------VCYAQNTFVLQG 784

  Fly   401 ITSFGKFCAAPNAPGVYTRLYSYLDWIEK 429
            :||:|..||....||||||:..::||||:
Zfish   785 VTSWGLGCANAMKPGVYTRVSKFVDWIER 813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829 13/52 (25%)
Tryp_SPc 186..430 CDD:238113 84/254 (33%)
plgNP_958880.2 PAN_AP_HGF 31..104 CDD:238532
KR 109..190 CDD:214527
KR 190..270 CDD:214527
KR 281..361 CDD:214527
Kringle 376..453 CDD:395005 14/83 (17%)
KR 490..572 CDD:214527 11/81 (14%)
Tryp_SPc 589..813 CDD:238113 83/252 (33%)
Blue background indicates that the domain is not in the aligned region.

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