DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG32808

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_726740.1 Gene:CG32808 / 318221 FlyBaseID:FBgn0052808 Length:284 Species:Drosophila melanogaster


Alignment Length:250 Identity:87/250 - (34%)
Similarity:124/250 - (49%) Gaps:32/250 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDM-VRL 249
            ||.||....|.||.:.:|...: ||      :..||..|::..:||||||| ..||.|..: ::.
  Fly    30 IVNGTTAGPGEFPFVVSLRRAK-SG------RHSCGATLLNPYWVLTAAHC-VRGSSPEQLDLQY 86

  Fly   250 GARQLNETSATQQDIKILIIVLHPKYR-SSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIP 313
            |::.|...|:  |..::..|.:||.|. ...|.:|||||:|.:.|..|:.|:|.   :|||.:..
  Fly    87 GSQMLARNSS--QVARVAAIFVHPGYEPEDKYVNDIALLQLAQSVALSKFVQPV---RLPEPRQV 146

  Fly   314 T-----VVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGG 373
            |     .|.||||.....|.....|::|.|.|.....|.:      |....:.:.|.|||...||
  Fly   147 TPGNASAVLAGWGLNATGGVVQQHLQKVKLQVFSDTECSE------RHQTYLHDSQICAGLPEGG 205

  Fly   374 RDTCQGDSGGPIHALLPEYNCVAFVVGITSFG-KFCAAPNAPGVYTRLYSYLDWI 427
            :..|.||||||:..:..:..     |||.|:. |.||.|..|||:|.:.:|:|||
  Fly   206 KGQCSGDSGGPLLLIGSDTQ-----VGIVSWSIKPCARPPFPGVFTEVSAYVDWI 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 86/249 (35%)
CG32808NP_726740.1 Tryp_SPc 30..258 CDD:238113 86/249 (35%)
Blue background indicates that the domain is not in the aligned region.

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