DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snk and CG32260

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_728942.1 Gene:CG32260 / 317943 FlyBaseID:FBgn0052260 Length:575 Species:Drosophila melanogaster


Alignment Length:401 Identity:112/401 - (27%)
Similarity:171/401 - (42%) Gaps:95/401 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 DGRS--GYCILAYQCLHVIREYRVHGTRI------DICTHRNNVPVICCPLADKHVLAQRISATK 154
            |.||  |.|:....|..:::||:......      .||....:..::||             ||.
  Fly   196 DARSRPGSCLPLTSCPQLMQEYQGQANEFHTFLGQSICGFDGSTFMVCC-------------ATD 247

  Fly   155 CQEYNAAARRLHLTDTGRTF---------SGKQCVPSV-----PL-------------------- 185
             :..||.:|:.....|...|         .|....|.|     ||                    
  Fly   248 -RSGNARSRKDVFVTTAAPFGFFHFSPLSGGSTATPMVFQPTPPLSQVVSPSFYPPPPPPPPNNA 311

  Fly   186 ----------------IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAA 234
                            :|||...|.|.:|.:||||:.:.:..  ..:|:.|||:|:...||:|:|
  Fly   312 PRESATCGISGATSNRVVGGMEARKGAYPWIAALGYFEENNR--NALKFLCGGSLIHSRYVITSA 374

  Fly   235 HCATSGSKPP--DMVRLGARQLNETSAT-QQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFS 296
            ||..     |  .:|||||..|::.:.: ..|::|...|:|..:..::..:||||::|.......
  Fly   375 HCIN-----PMLTLVRLGAHDLSQPAESGAMDLRIRRTVVHEHFDLNSISNDIALIELNVVGALP 434

  Fly   297 EQVRPACLWQLPELQIPTVV-----AAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRL 356
            ..:.|.||.:..:......|     .||||..:..|..|..||...:.:|.:.:|:|.|:...:.
  Fly   435 GNISPICLPEAAKFMQQDFVGMNPFVAGWGAVKHQGVTSQVLRDAQVPIVSRHSCEQSYKSIFQF 499

  Fly   357 PRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLP--EYNCVAF-VVGITSFGKFCAAPNAPGVYT 418
            .: ..:...|||  ....|.||||||||:  ::|  |.|...| ::|:.|||..||.||.|||||
  Fly   500 VQ-FSDKVLCAG--SSSVDACQGDSGGPL--MMPQLEGNVYRFYLLGLVSFGYECARPNFPGVYT 559

  Fly   419 RLYSYLDWIEK 429
            |:.||:.||:|
  Fly   560 RVASYVPWIKK 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829 11/48 (23%)
Tryp_SPc 186..430 CDD:238113 88/255 (35%)
CG32260NP_728942.1 CLIP 194..244 CDD:463440 10/47 (21%)
Tryp_SPc 328..571 CDD:238113 88/255 (35%)

Return to query results.
Submit another query.