DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG6048

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_572282.1 Gene:CG6048 / 31528 FlyBaseID:FBgn0029827 Length:362 Species:Drosophila melanogaster


Alignment Length:296 Identity:95/296 - (32%)
Similarity:126/296 - (42%) Gaps:64/296 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 AARRLHL----------TDTGRTFSGKQCVPSVPLIVGGTPTRHGLFPHMAAL------GWTQGS 209
            |..|.||          .|.||             |:.||....|...|...:      |:..|:
  Fly    24 ATTRTHLDTKAIRPRFNADPGR-------------IINGTEASLGATRHQVGIRKALNDGYFFGT 75

  Fly   210 GSKDQDIKWGCGGALVSELYVLTAAHC--------ATSGSKPPDMVRLG-ARQLNETSATQQDIK 265
            |..       |||:|:...:|||||||        .|...|...:|.:| ..:.|.|:.....|:
  Fly    76 GHL-------CGGSLIRPGWVLTAAHCFVDQIIYDGTFVPKEEFIVVMGNLDRYNRTNTLTFTIE 133

  Fly   266 ILIIVLHPKYRSSAYYHDIALLKLTRRVKFSE-QVRPACL--WQLPELQIPTVVAAGWGRTEFLG 327
            ..|:.| .|:..|.|..|||||.|...|.... .:||..|  :.:||..:..|  .|||.||. |
  Fly   134 ERIMQL-DKFDLSTYDKDIALLMLNGTVPTGHPTIRPIALNRFAIPEGVVCQV--TGWGNTED-G 194

  Fly   328 AKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLP-GGRDTCQGDSGGPIHALLPE 391
            ..|:.|..||:.::.:..|    ..:..|...|..|..|||||. |.:|.|.||||||:      
  Fly   195 YVSDILMTVDVPMISEEHC----INDSDLGHLIQPGMICAGYLEVGEKDACAGDSGGPL------ 249

  Fly   392 YNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
             .|.:.:.|:.|:|..||.|..|||||.:..|.|||
  Fly   250 -VCQSELAGVVSWGIQCALPRLPGVYTEVSYYYDWI 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 88/261 (34%)
CG6048NP_572282.1 Tryp_SPc 45..284 CDD:214473 87/273 (32%)
Blue background indicates that the domain is not in the aligned region.

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