DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG6041

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster


Alignment Length:292 Identity:87/292 - (29%)
Similarity:124/292 - (42%) Gaps:75/292 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 TGRTFSGKQCVPSVPLIVGGTPTRHGLFPHMAALGWT------QGSGSKDQDIKWGCGGALVSEL 228
            :|.:.|.:......|.||||.........:..::..|      .|||..       |||.::|:.
  Fly    19 SGESLSSETAGKIEPKIVGGYDASIEQVSYQVSIRLTANDKKSYGSGHL-------CGGVVISQR 76

  Fly   229 YVLTAAHCA---------TSGSKPPDMVRLGARQLNETSATQQDIKILI--IVLHPKYRSSAYYH 282
            .|.|||||.         |:|.   .::.:|:..|  ||:|.:.:...:  ::.|..|...|..:
  Fly    77 LVATAAHCCYITDKKKYRTAGE---FVLVMGSTYL--TSSTDRTLMYYLQQLITHENYNPDALTN 136

  Fly   283 DIALLKLTRRVKFSEQVRPACLWQLPELQIPTVVA----------------AGWGRTEFLGA-KS 330
            ||||:.:...:.::        |       |||.|                :|||..:..|. .|
  Fly   137 DIALMFINGYIPWN--------W-------PTVTALALNSQLVATNTDCLISGWGLLQQNGTFSS 186

  Fly   331 NALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCV 395
            |.|:...:.:|...||:..|       ..|...|.|||||.||.|.||||||||:       :|.
  Fly   187 NTLQAATVPIVSYTTCRISY-------NSIPVSQVCAGYLSGGVDACQGDSGGPM-------SCN 237

  Fly   396 AFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
            ..:.||.|:|..||||..|||||.:..|.|||
  Fly   238 GMLAGIVSYGAGCAAPGYPGVYTNVSYYYDWI 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 84/276 (30%)
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 82/275 (30%)
Blue background indicates that the domain is not in the aligned region.

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