DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG14780

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_569920.2 Gene:CG14780 / 31102 FlyBaseID:FBgn0025383 Length:302 Species:Drosophila melanogaster


Alignment Length:248 Identity:77/248 - (31%)
Similarity:104/248 - (41%) Gaps:80/248 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 CGGALVSELYVLTAAHCATSGSKPPDMVRLGARQLNETSATQQDIKILIIVLHPKYR-------- 276
            |||||::...|||||||..:..      |...|:.:|          .::||....|        
  Fly    65 CGGALIAPRKVLTAAHCLYNNQ------RKRFRRASE----------FVVVLGTLNRFEHRNGTI 113

  Fly   277 -----SSAYYH---------DIALLKL---------------TRRVKFSEQVR-PACLWQLPELQ 311
                 |.||.|         |:.:|.|               ...::.:.|:. |..|.|:    
  Fly   114 VSQVSSMAYMHTFSPDSMRDDVGILFLRTGLPMSPGGGVHLTVAPIQLAGQITPPGKLCQV---- 174

  Fly   312 IPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDT 376
                  ||||||| ..:.||.|...::..:...||:.|||.      |::.|..|||.|.||.|:
  Fly   175 ------AGWGRTE-QSSLSNILLTANVSTIRHQTCRMIYRS------GLLPGMMCAGRLQGGTDS 226

  Fly   377 CQGDSGGP-IHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIE 428
            |||||||| :|.        ..:||:.|:|..||.|..||||..:..|..|||
  Fly   227 CQGDSGGPLVHE--------GRLVGVVSWGYGCAEPGLPGVYVDVEYYRQWIE 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 77/248 (31%)
CG14780NP_569920.2 Tryp_SPc 33..271 CDD:238113 75/246 (30%)
Blue background indicates that the domain is not in the aligned region.

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