DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snk and F10

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_058839.1 Gene:F10 / 29243 RGDID:61850 Length:482 Species:Rattus norvegicus


Alignment Length:454 Identity:116/454 - (25%)
Similarity:185/454 - (40%) Gaps:91/454 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 NLEALDALEIINYQTTKYTIPEVWKEQPVATIGEDVDDQDTEDEESYLKFGDDAEVRTSVSEGLH 88
            |||.....||.:::..:    ||:::....|             |.:.|:.|..:..:|..:...
  Rat    52 NLERECVEEICSFEEAR----EVFEDNEKTT-------------EFWNKYEDGDQCESSPCQNQG 99

  Fly    89 E-----GAF---CRRSFDGRSGYCILAYQCLHVIREYRVHGTRIDICTHRNNVPVICCP----LA 141
            |     |::   |...|:|::  |.|..:.|..:.    :|.....|....|..|..|.    |.
  Rat   100 ECRDGLGSYTCTCTEGFEGKN--CELFVRKLCSLD----NGDCDQFCREEQNSVVCSCAKGYFLG 158

  Fly   142 DKHVLAQRISATKCQEYN--AAARRLHLTDTGRTFSGKQCVPSVPL------------------- 185
            :........:...|.:.|  .|.|.:.|..:......:..:|...:                   
  Rat   159 NDGKSCLSTAPFPCGKTNKGRAKRSVALNTSNSEPDPEDLMPDADILYPTESPSELLNLNKTEPE 223

  Fly   186 --------IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSK 242
                    ||||...:.|..|..|.|       ..|::....|||.:::|.|:||||||.....:
  Rat   224 ANSDDVIRIVGGQECKRGECPWQALL-------FSDEETDGFCGGTILNEFYILTAAHCLHQAKR 281

  Fly   243 PPDMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACL--- 304
              ..||:|.....:....:...::.:|:.|.|::...|..|||:|:|...:.|.|.|.||||   
  Rat   282 --FKVRVGDLNTEQEDGGEMVHEVDMIIKHNKFQRDTYDFDIAMLRLKTPITFRENVAPACLPQK 344

  Fly   305 -WQLPELQI-PTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPR--GIIEGQF 365
             |....|.. .|.:.:|:|||...|.:|..|:.:::..|.:.||        ||..  .|.:..|
  Rat   345 DWAEATLMTQKTGIVSGFGRTHEKGRQSKVLKMMEVPYVDRNTC--------RLSTSFSITQNMF 401

  Fly   366 CAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEK 429
            ||||.....|.|||||||| |  :..:....||.||.|:|:.||.....|:||::.::|.||::
  Rat   402 CAGYDAKQEDACQGDSGGP-H--VTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDR 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829 10/45 (22%)
Tryp_SPc 186..430 CDD:238113 84/251 (33%)
F10NP_058839.1 GLA 23..84 CDD:214503 9/48 (19%)
EGF_CA 86..122 CDD:238011 7/37 (19%)
FXa_inhibition 129..164 CDD:464251 6/38 (16%)
Tryp_SPc 232..462 CDD:238113 84/249 (34%)

Return to query results.
Submit another query.