DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Prss34

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001099242.1 Gene:Prss34 / 287140 RGDID:1306667 Length:316 Species:Rattus norvegicus


Alignment Length:282 Identity:99/282 - (35%)
Similarity:127/282 - (45%) Gaps:54/282 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 DTGRTFSGKQCVPSVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTA 233
            |:|:...|         ||||.|.....||...:|.:.....||.:.|   |||:|:...:||||
  Rat    25 DSGQELVG---------IVGGCPVSASRFPWQVSLRFYNMKLSKWEHI---CGGSLIHPQWVLTA 77

  Fly   234 AHCATSGSKPPDMVRLGARQLNETSATQQDIKILIIVLHPKYR---SSAYYHDIALLKLTRRVKF 295
            |||...........|:...|| ......|.:|:..|:.|||:.   |:....|||||||...|..
  Rat    78 AHCVELKEMEASCFRVQVGQL-RLYENDQLMKVAKIIRHPKFSEKLSAPGGADIALLKLDSTVVL 141

  Fly   296 SEQVRPACL-------------WQLPELQIPTVVAAGWGRTEFLGAKSNA----LRQVDLDVVPQ 343
            ||:|.|..|             |           .||||..|  |.:...    ||:|.:.:|..
  Rat   142 SERVHPVSLPAASQRISSKKTWW-----------VAGWGVIE--GHRPLPPPCHLREVAVPIVGN 193

  Fly   344 MTCKQIYRKERRLPRG---IIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFG 405
            ..|:|.||....|.|.   |.:...|||.  .|||:||.|||||   |:..:||....||:.|:|
  Rat   194 SDCEQKYRTYSSLDRTTKIIKDDMLCAGM--EGRDSCQADSGGP---LVCRWNCSWVQVGVVSWG 253

  Fly   406 KFCAAPNAPGVYTRLYSYLDWI 427
            ..|..|:.||||||:.|||.||
  Rat   254 IGCGLPDFPGVYTRVMSYLSWI 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 96/265 (36%)
Prss34NP_001099242.1 Tryp_SPc 33..276 CDD:238113 96/265 (36%)
Blue background indicates that the domain is not in the aligned region.

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