DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Prss30

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_955403.2 Gene:Prss30 / 287106 RGDID:735142 Length:304 Species:Rattus norvegicus


Alignment Length:263 Identity:94/263 - (35%)
Similarity:134/263 - (50%) Gaps:32/263 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDM---- 246
            ||||.....|.:|...:|     ...|:..|   |||:|:.|::|||||||.   .:|.:.    
  Rat    31 IVGGQDAPEGRWPWQVSL-----RTEKEGHI---CGGSLIHEVWVLTAAHCF---CRPLNSSFYH 84

  Fly   247 VRLGARQLNETSATQQDIKILIIVLHPKYR-SSAYYHDIALLKLTRRVKFSEQVRPACLWQLPEL 310
            |::|...|:.|......:.:..|.::|.|. ..|...|||||:|...::.| |..|.|   ||:.
  Rat    85 VKVGGLTLSLTEPHSTLVAVRNIFVYPTYLWEDASSGDIALLRLDTPLQPS-QFSPVC---LPQA 145

  Fly   311 QIP----TVV-AAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYR-KERRL--PRGIIEGQFCA 367
            |.|    ||. ..|||.|......| .|:::.:.::....|:::|. .|..|  .|.|.....||
  Rat   146 QAPLTPGTVCWVTGWGATHERELAS-VLQELAVPLLDSEDCERMYHIGETSLSGKRVIQSDMLCA 209

  Fly   368 GYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIEKIAF 432
            |::.|.:|:||||||||   |:...|.....|||||:|..||.||.||||||:..|:|||::...
  Rat   210 GFVEGQKDSCQGDSGGP---LVCAINSSWIQVGITSWGIGCARPNKPGVYTRVPDYVDWIQRTLA 271

  Fly   433 KQH 435
            :.|
  Rat   272 ENH 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 93/256 (36%)
Prss30NP_955403.2 Tryp_SPc 31..269 CDD:238113 93/256 (36%)
Blue background indicates that the domain is not in the aligned region.

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