DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG33225

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001286682.1 Gene:CG33225 / 2768860 FlyBaseID:FBgn0053225 Length:307 Species:Drosophila melanogaster


Alignment Length:238 Identity:84/238 - (35%)
Similarity:120/238 - (50%) Gaps:43/238 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 CGGALVSELYVLTAAHCATSGSKPPDMVRLGARQLNETSATQQDIKILI----IVLHPKY-RSSA 279
            |.|:|::.|:|||:|.|..|   .|..|.||....|.|||....|:.:|    .::|.:: ..:.
  Fly    82 CSGSLITRLFVLTSASCLLS---LPKQVILGEYDRNCTSADCTSIRQVIDIDQKIIHGQFGLETV 143

  Fly   280 YYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPTVV----AAGWGRTEFLGAKSNALRQVDLDV 340
            ..:|||||:|.::|..|:.|||.||  ..:.|:...|    |.|||.||: ...|..|:.|.|..
  Fly   144 KKYDIALLRLAKKVSISDYVRPICL--SVDRQVGRSVQHFTATGWGTTEW-NEPSTILQTVTLSK 205

  Fly   341 VPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGR-DTCQGDSGGPIHALLP-----EYN--CVAF 397
            :.:..||      .||.:.|...|.|.|   |.| |||.||:|||:...|.     ::|  ..||
  Fly   206 INRKYCK------GRLRQNIDASQLCVG---GPRKDTCSGDAGGPLSLTLKIDGDGKWNNKSRAF 261

  Fly   398 VVGITSFGKFCAAPNAPGVYTRLYSYLDWI---------EKIA 431
            ::||.|:|.  ::.:..||||.:..|:|||         ||||
  Fly   262 LIGIVSYGS--SSCSGIGVYTNVEHYMDWIVRTINKSNTEKIA 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 81/235 (34%)
CG33225NP_001286682.1 Tryp_SPc 56..289 CDD:214473 78/223 (35%)
Blue background indicates that the domain is not in the aligned region.

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