DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG33462

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_995844.2 Gene:CG33462 / 2768841 FlyBaseID:FBgn0053462 Length:300 Species:Drosophila melanogaster


Alignment Length:252 Identity:72/252 - (28%)
Similarity:106/252 - (42%) Gaps:46/252 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 PHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDM---VRLGARQLNETSA 259
            |.||.|...:|         :.|.|.|::.|:|||||||.     |.|:   ||||  :.|..:.
  Fly    48 PWMAYLETPKG---------FHCSGTLINHLFVLTAAHCV-----PDDLLITVRLG--EYNTKTK 96

  Fly   260 TQ----------QDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACL-----WQLPE 309
            ..          |:..:.:...|..|.::...:||.:|:|.|||::...:||.|:     :|.|.
  Fly    97 VDCDNHLCQEPFQEYNVDMGFRHRYYNANDQTNDIGMLRLGRRVEYLNHIRPICIFASNRFQEPI 161

  Fly   310 LQIPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGR 374
            .|:.......|..|. ..|.|..||.:::|..|:.||.:||.......      |.|||....  
  Fly   162 DQLTWFTTTVWRETA-ANATSKVLRTMNIDRQPKETCSEIYGWNMTFE------QICAGNTLS-- 217

  Fly   375 DTCQGDSGGPIHALLPEYNCVAFV-VGITSFGKFCAAPNAPGVYTRLYSYLDWIEKI 430
            ..|..|||.|....:.......:| :||.|..|  ......|:...|.||.|||:::
  Fly   218 QLCSTDSGAPQIRKMWHNGSDRYVQLGIASRVK--GQCQNSGILMDLLSYADWIKRV 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 72/250 (29%)
CG33462NP_995844.2 Tryp_SPc 48..272 CDD:238113 72/250 (29%)
Blue background indicates that the domain is not in the aligned region.

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