DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG33461

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_995843.3 Gene:CG33461 / 2768840 FlyBaseID:FBgn0053461 Length:287 Species:Drosophila melanogaster


Alignment Length:281 Identity:83/281 - (29%)
Similarity:132/281 - (46%) Gaps:50/281 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 FSGKQC--VPSVPL-IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAH 235
            |..:.|  ||.:.. |:.|||.|.|.:|.||.|         .....:.|.|:|:::.:|||:||
  Fly    27 FLEENCGVVPRLSYKIINGTPARLGRYPWMAFL---------HTPTYFLCAGSLINQWFVLTSAH 82

  Fly   236 CATSGSKPPDMVRLGAR------------QLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLK 288
            |.      .|.|.|.||            :.|......|:..:.::..|..|....:.:||.:|:
  Fly    83 CI------EDDVELIARLGENNRDNDIDCENNRCLEATQEYNVDMLFKHRLYDPKDFSNDIGMLR 141

  Fly   289 LTRRVKFSEQVRPACLW-----QLPELQIPTVVAAGWGRTEF-LGAKSN-ALRQVDLDVVPQMTC 346
            |.|||:::..::|.|::     ||...||....|.|||.|.. |..||: .|.:::|...|:..|
  Fly   142 LERRVEYTYHIQPICIFHHRRMQLVVDQITWFKATGWGLTSTDLNTKSSRVLMELNLYRRPRNDC 206

  Fly   347 KQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFV-VGITSFG-KFCA 409
            .:|::      :..:.||.|||...|  :.|:||||||....:..:....|| :||.||. :.|:
  Fly   207 ARIFK------QNFLSGQICAGNDDG--NLCRGDSGGPQGRYVLIFGMKRFVQMGIASFTYENCS 263

  Fly   410 APNAPGVYTRLYSYLDWIEKI 430
            ..:   :.|.:..|..||:|:
  Fly   264 KVS---ILTDVVRYGRWIKKV 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 78/264 (30%)
CG33461NP_995843.3 Tryp_SPc 41..278 CDD:214473 76/262 (29%)
Blue background indicates that the domain is not in the aligned region.

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