DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Sp212

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_996209.2 Gene:Sp212 / 2768666 FlyBaseID:FBgn0053329 Length:516 Species:Drosophila melanogaster


Alignment Length:257 Identity:68/257 - (26%)
Similarity:117/257 - (45%) Gaps:25/257 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 SVPLIVGGTPTRHGLFPHMAALGWTQGSGSKD-QDIKWGCGGALVSELYVLTAAHCATSGSKPPD 245
            :.|.||.|.....|.:|      |......|: :.:.:.|.|:|:|...|::||||....::...
  Fly   273 TTPFIVRGNEFPRGQYP------WLSAVYHKEVRALAFKCRGSLISSSIVISAAHCVHRMTEDRV 331

  Fly   246 MVRLGARQLNETSATQQDIK-ILIIVLHPKYRSSAYYH-DIALLKLTRRVKFSEQVRPACLWQLP 308
            :|.||...|::......::: ::.::.||.|.:.:|.. ||||:.:.|.|.|::.:.|.|:|.:.
  Fly   332 VVGLGRYDLDDYGEDGAEMRNVMRLLWHPDYNTRSYSDADIALITIERPVTFNDIIAPICMWTVE 396

  Fly   309 ELQI--PTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLP 371
            ..:.  .|...|||||.|. .:::...|.|:.::.....|...:|...     :.|...|||...
  Fly   397 ASRTVSTTGFIAGWGRDED-SSRTQYPRVVEAEIASPTVCASTWRGTM-----VTERSLCAGNRD 455

  Fly   372 GGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAP----NAPGVYTRLYSYLDWIEK 429
            |. ..|.|||||   .|:.:......:.||.|.|:...|.    |...:|..|..:::||.:
  Fly   456 GS-GPCVGDSGG---GLMVKQGDRWLLRGIVSAGERGPAGTCQLNQYVLYCDLSKHINWISE 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 67/253 (26%)
Sp212NP_996209.2 GD_N 23..127 CDD:464985
Tryp_SPc 277..514 CDD:238113 67/253 (26%)
Blue background indicates that the domain is not in the aligned region.

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