DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Tpsg1

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_006524421.1 Gene:Tpsg1 / 26945 MGIID:1349391 Length:368 Species:Mus musculus


Alignment Length:274 Identity:88/274 - (32%)
Similarity:121/274 - (44%) Gaps:51/274 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 SGKQC-VPSV----PLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAA 234
            ||..| .|.|    ..||||.....|.:|..|:|...:         ...|||:|:|..:|||||
Mouse    71 SGSGCGHPQVSNSGSRIVGGHAAPAGTWPWQASLRLHK---------VHVCGGSLLSPEWVLTAA 126

  Fly   235 HCATSGSKPPD-MVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQ 298
            ||.:......| .|.||...:..:.......:|::....|....|:  .||||::|:..|..|.|
Mouse   127 HCFSGSVNSSDYQVHLGELTVTLSPHFSTVKRIIMYTGSPGPPGSS--GDIALVQLSSPVALSSQ 189

  Fly   299 VRPACLWQ-----LPELQIPTVVAAGWGRT---EFLGAKSNALRQVDLDVVPQMTCKQIYRKERR 355
            |:|.||.:     .|.:|   ....|||.|   |.|....| |::..:.||...||.|.|..   
Mouse   190 VQPVCLPEASADFYPGMQ---CWVTGWGYTGEGEPLKPPYN-LQEAKVSVVDVKTCSQAYNS--- 247

  Fly   356 LPRG-IIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFV------VGITSFGKFCAAPNA 413
             |.| :|:........||  |.||.|||||:         |..|      .|:.|:|:.|..|:.
Mouse   248 -PNGSLIQPDMLCARGPG--DACQDDSGGPL---------VCQVAGTWQQAGVVSWGEGCGRPDR 300

  Fly   414 PGVYTRLYSYLDWI 427
            ||||.|:.:|::||
Mouse   301 PGVYARVTAYVNWI 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 83/258 (32%)
Tpsg1XP_006524421.1 Tryp_SPc 87..317 CDD:238113 83/258 (32%)
Blue background indicates that the domain is not in the aligned region.

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