DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Plat

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_006253409.3 Gene:Plat / 25692 RGDID:3342 Length:596 Species:Rattus norvegicus


Alignment Length:256 Identity:73/256 - (28%)
Similarity:121/256 - (47%) Gaps:35/256 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 GLFPHMAALGWTQG---SGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDM-VRLGARQLN 255
            |||..:.:..|...   ...:....::.|||.|:|..:||:||||......|..: |.||.....
  Rat   349 GLFTDITSHPWQAAIFVKNKRSPGERFLCGGVLISSCWVLSAAHCFVERFPPHHLKVVLGRTYRV 413

  Fly   256 ETSATQQDIKILIIVLHPKYRSSAYYHDIALLKL----TRRVKFSEQVRPACLWQLPELQIP--- 313
            .....:|..:|...::|.::....|.:|||||:|    ::..:.|..|..|||.. |::|:|   
  Rat   414 VPGEEEQTFEIEKYIVHKEFDDDTYDNDIALLQLRSDSSQCAQESSSVGTACLPD-PDVQLPDWT 477

  Fly   314 TVVAAGWGRTE----FLGAKSNALRQVDLDVVPQMTC--KQIYRKERRLPRGIIEGQFCAGYLPG 372
            ....:|:|:.|    |.   |:.|::..:.:.|...|  :.::.|.      |.....|||....
  Rat   478 ECELSGYGKHEASSPFF---SDRLKEAHVRLYPSSRCTSQHLFNKT------ITSNMLCAGDTRT 533

  Fly   373 G-----RDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIE 428
            |     .|.||||||||:..::.:.   ..::||.|:|..|...:.||:||::.:||:||:
  Rat   534 GGNQDVHDACQGDSGGPLVCMIDKR---MTLLGIISWGLGCGQKDVPGIYTKVTNYLNWIQ 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 73/256 (29%)
PlatXP_006253409.3 None
Blue background indicates that the domain is not in the aligned region.

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