DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Proc

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_008770240.3 Gene:Proc / 25268 RGDID:3411 Length:500 Species:Rattus norvegicus


Alignment Length:420 Identity:119/420 - (28%)
Similarity:171/420 - (40%) Gaps:101/420 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 QDTEDEESY-LKFGDDAEVRT---------------SVSEGLHEGAF---CRRSFDGRSGYCILA 107
            |:.||..:: :|:.|..:..|               :..:||  |.|   |.:.::||.....:.
  Rat   112 QNVEDTLAFWIKYFDGDQCSTPPLDHQCDSPCCGHGTCIDGL--GGFSCSCDKGWEGRFCQQEMG 174

  Fly   108 YQ--------CLHVIREYRVHGTRIDICTHRNNVPVICCP---LADKHVLAQRISATKCQEYNAA 161
            :|        |.|    |.:..||...|.        |.|   |||.|:..:......|      
  Rat   175 FQDCRVKNGGCYH----YCLEETRGRRCA--------CAPGYELADDHMHCRPTVNFPC------ 221

  Fly   162 ARRLHLTDTGRTFSGKQCVPS------VPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGC 220
            .:....||..|....:...|.      .|.||.||.|:.|..|..|.|        .|...|..|
  Rat   222 GKLWKRTDKKRKNFKRDIDPEDEELELGPRIVNGTLTKQGDSPWQAIL--------LDSKKKLAC 278

  Fly   221 GGALVSELYVLTAAHCATSGSKPPDMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIA 285
            ||.|:...:|||||||..|..|.  .||||...|......:.|:.|..:::||.|..|...:|||
  Rat   279 GGVLIHTSWVLTAAHCLESSKKL--TVRLGEYDLRRRDPWELDLDIKEVLVHPNYTRSNSDNDIA 341

  Fly   286 LLKLTRRVKFSEQVRPACL------WQLPELQIPTVVAAGWG------------RTEFLGAKSNA 332
            ||:|::....|:.:.|.||      .:|.:....||| .|||            || |:      
  Rat   342 LLRLSQPATLSKTIVPICLPNSGLAQELSQAGQETVV-TGWGYQSDKVKDGRRNRT-FI------ 398

  Fly   333 LRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAF 397
            |..:.:.:..:..|.|:      :...:.|...|||.:...||.|.||||||   ::..:....|
  Rat   399 LTFIRIPLAARNDCMQV------MNNVVSENMLCAGIIGDTRDACDGDSGGP---MVVFFRGTWF 454

  Fly   398 VVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
            :||:.|:|:.|...|..||||::.|||.||
  Rat   455 LVGLVSWGEGCGHLNNYGVYTKVGSYLKWI 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829 11/53 (21%)
Tryp_SPc 186..430 CDD:238113 87/260 (33%)
ProcXP_008770240.3 GLA 65..125 CDD:214503 4/12 (33%)
EGF_CA 126..170 CDD:238011 9/45 (20%)
FXa_inhibition 178..213 CDD:464251 12/46 (26%)
Tryp_SPc 252..486 CDD:238113 87/260 (33%)

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