DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Prss2

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_036861.1 Gene:Prss2 / 25052 RGDID:3418 Length:246 Species:Rattus norvegicus


Alignment Length:247 Identity:83/247 - (33%)
Similarity:123/247 - (49%) Gaps:34/247 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250
            ||||...:....|:..:|    .||..      .|||:|:::.:|::||||..|..:    ||||
  Rat    24 IVGGYTCQENSVPYQVSL----NSGYH------FCGGSLINDQWVVSAAHCYKSRIQ----VRLG 74

  Fly   251 ARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPT- 314
            ...:|.....:|.:....|:.||.:......:||.|:||:..||.:.:|....   ||....|. 
  Rat    75 EHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVA---LPSSCAPAG 136

  Fly   315 --VVAAGWGRTEFLGAKSNALRQ-VDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDT 376
              .:.:|||.|...|.....|.| :|..::||..|:..|      |..|.:...|.|:|.||:|:
  Rat   137 TQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASY------PGKITDNMVCVGFLEGGKDS 195

  Fly   377 CQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIE 428
            ||||||||:       .|...:.||.|:|..||.|:.|||||::.:|:|||:
  Rat   196 CQGDSGGPV-------VCNGELQGIVSWGYGCALPDNPGVYTKVCNYVDWIQ 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 83/247 (34%)
Prss2NP_036861.1 Tryp_SPc 24..242 CDD:238113 83/247 (34%)
Blue background indicates that the domain is not in the aligned region.

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