DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Prss1

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_036767.1 Gene:Prss1 / 24691 RGDID:3417 Length:246 Species:Rattus norvegicus


Alignment Length:248 Identity:88/248 - (35%)
Similarity:125/248 - (50%) Gaps:36/248 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGG-TPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRL 249
            |||| |...|.: |:..:|    .||..      .|||:|:::.:|::||||..|..:    |||
  Rat    24 IVGGYTCPEHSV-PYQVSL----NSGYH------FCGGSLINDQWVVSAAHCYKSRIQ----VRL 73

  Fly   250 GARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPT 314
            |...:|.....:|.|....|:.||.|.|....:||.|:||:..||.:.:|.|..   ||....|.
  Rat    74 GEHNINVLEGDEQFINAAKIIKHPNYSSWTLNNDIMLIKLSSPVKLNARVAPVA---LPSACAPA 135

  Fly   315 ---VVAAGWGRTEFLGAKSNALRQ-VDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRD 375
               .:.:|||.|...|..:..|.| ||..|:.|..|:..|      |..|.....|.|:|.||:|
  Rat   136 GTQCLISGWGNTLSNGVNNPDLLQCVDAPVLSQADCEAAY------PGEITSSMICVGFLEGGKD 194

  Fly   376 TCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIE 428
            :||||||||:       .|...:.||.|:|..||.|:.|||||::.:::.||:
  Rat   195 SCQGDSGGPV-------VCNGQLQGIVSWGYGCALPDNPGVYTKVCNFVGWIQ 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 88/248 (35%)
Prss1NP_036767.1 Tryp_SPc 24..242 CDD:238113 88/248 (35%)
Blue background indicates that the domain is not in the aligned region.

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