DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snk and CG30289

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_726081.1 Gene:CG30289 / 246532 FlyBaseID:FBgn0050289 Length:316 Species:Drosophila melanogaster


Alignment Length:267 Identity:86/267 - (32%)
Similarity:125/267 - (46%) Gaps:38/267 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 PSVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPD 245
            |.||.|.||..|.....|.| .|.|:    ||.      |||:|::..:|||||||.:.    .|
  Fly    37 PYVPNIFGGAKTNIQENPWM-VLVWS----SKP------CGGSLIARQFVLTAAHCVSF----ED 86

  Fly   246 M-VRLGARQL---------NETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVR 300
            : ||||..:.         |.......:|.:.:.::|..|......:|||||:::..|::|:.||
  Fly    87 LYVRLGDYETLDPMPYCLNNHCIPKFYNISVDMKIVHENYNGITLQNDIALLRMSEAVEYSDYVR 151

  Fly   301 PACLWQLPELQ-IPTVVAAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQ 364
            |.||....::| ||.....|||.||: |..|..|....|..:....|...:.|:..      ..|
  Fly   152 PICLLVGEQMQSIPMFTVTGWGETEY-GQFSRILLNATLYNMDISYCNIKFNKQAD------RSQ 209

  Fly   365 FCAGYLPGGRDTCQGDSGGPIHALLPEYN-CVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI- 427
            .|||  ....:||:||||||:.:.....| .::|..|:.|:|....|.|..||||.:..:.:|| 
  Fly   210 ICAG--SHTSNTCKGDSGGPLSSKFHYGNRLLSFQYGLVSYGSERCAANVAGVYTNVSYHREWIF 272

  Fly   428 -EKIAFK 433
             :.:.||
  Fly   273 NKMVQFK 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 81/257 (32%)
CG30289NP_726081.1 Tryp_SPc 42..271 CDD:238113 79/252 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.