DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and CG30083

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_725492.3 Gene:CG30083 / 246444 FlyBaseID:FBgn0050083 Length:279 Species:Drosophila melanogaster


Alignment Length:255 Identity:87/255 - (34%)
Similarity:130/255 - (50%) Gaps:42/255 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 PLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDI-KWGCGGALVSELYVLTAAHCATSGSKPPDM- 246
            |.|:.|....:|..|.||.:     ....|::: :..|||.|:.:.:||:||||.    |...: 
  Fly    32 PKIMHGQNAENGTNPWMAYI-----FKYNDKEVAELVCGGTLIHKQFVLSAAHCI----KRDQIL 87

  Fly   247 -VRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPEL 310
             ||||....:...|..:..:      :..:.:.:|.:||.:|::...|||:..:||.|:...| .
  Fly    88 AVRLGEHSSSRYFAVTKAFR------NKYFTTGSYSNDIGILRIQPIVKFNAVIRPICIITDP-T 145

  Fly   311 QIP---TVVAAGWGRTE---FLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGY 369
            ::|   |..|||||:||   |    |..|:.|:|:.:....|..:      |...:.|.|.|||:
  Fly   146 KVPNVKTFKAAGWGKTENETF----SKVLKTVELNELNASECYNM------LWVNVTESQICAGH 200

  Fly   370 LPGGRDTCQGDSGGP-IHALLPEYNCVAFVVGITSFG-KFCAAPNAPGVYTRLYSYLDWI 427
             |.| |||.|||||| ||.:..:.:.....:||.||| ..|   |:|||||||.|::|||
  Fly   201 -PDG-DTCAGDSGGPLIHPVYMDGSLRYVQLGIISFGSSLC---NSPGVYTRLSSFIDWI 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 86/253 (34%)
CG30083NP_725492.3 Tryp_SPc 34..255 CDD:238113 84/251 (33%)
Blue background indicates that the domain is not in the aligned region.

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