DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snk and Prss3

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_035775.1 Gene:Prss3 / 22073 MGIID:102758 Length:246 Species:Mus musculus


Alignment Length:247 Identity:83/247 - (33%)
Similarity:124/247 - (50%) Gaps:34/247 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250
            ||||...:....|:..:|    .||..      .|||:|:::.:|::||||    .|....||||
Mouse    24 IVGGYTCQENSVPYQVSL----NSGYH------FCGGSLINDQWVVSAAHC----YKTRIQVRLG 74

  Fly   251 ARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPT- 314
            ...:|.....:|.:....|:.||.:......:||.||||:..|..:.:|....   ||....|. 
Mouse    75 EHNINVLEGNEQFVNAAKIIKHPNFNRKTLNNDIMLLKLSSPVTLNARVATVA---LPSSCAPAG 136

  Fly   315 --VVAAGWGRTEFLG-AKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAGYLPGGRDT 376
              .:.:|||.|...| ::.:.|:.:|..::||..|:..|      |..|.....|||:|.||:|:
Mouse   137 TQCLISGWGNTLSFGVSEPDLLQCLDAPLLPQADCEASY------PGKITGNMVCAGFLEGGKDS 195

  Fly   377 CQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWIE 428
            ||||||||:       .|...:.||.|:|..||.|:.|||||::.:|:|||:
Mouse   196 CQGDSGGPV-------VCNRELQGIVSWGYGCALPDNPGVYTKVCNYVDWIQ 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 83/247 (34%)
Prss3NP_035775.1 Tryp_SPc 24..242 CDD:238113 83/247 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.