DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and F11

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_005262878.1 Gene:F11 / 2160 HGNCID:3529 Length:626 Species:Homo sapiens


Alignment Length:384 Identity:112/384 - (29%)
Similarity:170/384 - (44%) Gaps:85/384 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 CLHVIREYRVHGTRI---------DICTHRNNVPVIC----------------CPLADKHVLAQR 149
            ||....|..:..|||         .:.:.|:::||.|                ...|..|...|:
Human   255 CLLKTSESGLPSTRIKKSKALSGFSLQSCRHSIPVFCHSSFYHDTDFLGEELDIVAAKSHEACQK 319

  Fly   150 I--SATKCQ------------EYNAAARRLHLTDTGRT---------FSG---------KQCVPS 182
            :  :|.:||            |.|.....|.|:..|..         .||         .:|...
Human   320 LCTNAVRCQFFTYTPAQASCNEGNRGKCYLKLSSNGSPTKILHGRGGISGYTLRLCKMDNECTTK 384

  Fly   183 V-PLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDM 246
            : |.|||||.:..|.:|....|..|    |..|  :..|||:::...::|||||| ..|.:.|.:
Human   385 IKPRIVGGTASVRGEWPWQVTLHTT----SPTQ--RHLCGGSIIGNQWILTAAHC-FYGVESPKI 442

  Fly   247 VRLGARQLNETSATQQDIK---ILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLP 308
            :|:.:..||: |..::|..   :..|::|.:|:.:...:|||||||...|.:::..||.|   ||
Human   443 LRVYSGILNQ-SEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPIC---LP 503

  Fly   309 ELQIPTVV-----AAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAG 368
            ......|:     ..|||..:......|.|::..:.:|....|::.||..:     |.....|||
Human   504 SKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHK-----ITHKMICAG 563

  Fly   369 YLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
            |..||:|.|:||||||:..   ::|.|..:|||||:|:.||....|||||.:..|:|||
Human   564 YREGGKDACKGDSGGPLSC---KHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWI 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829 10/53 (19%)
Tryp_SPc 186..430 CDD:238113 87/250 (35%)
F11XP_005262878.1 APPLE 20..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519 6/27 (22%)
APPLE 291..375 CDD:128519 14/83 (17%)
Tryp_SPc 389..619 CDD:238113 85/248 (34%)
Blue background indicates that the domain is not in the aligned region.

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