DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and St14

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_036010597.1 Gene:St14 / 19143 MGIID:1338881 Length:875 Species:Mus musculus


Alignment Length:416 Identity:113/416 - (27%)
Similarity:173/416 - (41%) Gaps:95/416 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 QPVATIGEDVDDQDTEDEESYLKFGDDAEVRTSVSEGLHEGAFC-RRSFDGRSGYCILAYQCLHV 113
            :|:..:.:.|:|           .||.::         .||..| ..||...:|.|:...|    
Mouse   522 KPLFWVCDSVND-----------CGDGSD---------EEGCSCPAGSFKCSNGKCLPQSQ---- 562

  Fly   114 IREYRVHGTRIDICTHRNNVPVICCPLADKHVLAQRISATKCQEYNAAARR-LHL---------- 167
                        .|..::|     |...........::...|.:|....:. |.|          
Mouse   563 ------------KCNGKDN-----CGDGSDEASCDSVNVVSCTKYTYRCQNGLCLSKGNPECDGK 610

  Fly   168 TDTGRTFSGKQC------VPSVPLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVS 226
            ||.......|.|      ......:||||....|.:|...:| ...|.|..       ||.:|:|
Mouse   611 TDCSDGSDEKNCDCGLRSFTKQARVVGGTNADEGEWPWQVSL-HALGQGHL-------CGASLIS 667

  Fly   227 ELYVLTAAHCATSGS--KPPDMVR----LGARQLNETSAT-QQDIKILIIVLHPKYRSSAYYHDI 284
            ..::::||||.....  |..|...    ||....::.||: .|::|:..|:.||.:....:.:||
Mouse   668 PDWLVSAAHCFQDDKNFKYSDYTMWTAFLGLLDQSKRSASGVQELKLKRIITHPSFNDFTFDYDI 732

  Fly   285 ALLKLTRRVKFSEQVRPACLWQLPELQ--IP---TVVAAGWGRTEFLGAKSNALRQVDLDVVPQM 344
            |||:|.:.|::|..|||.|   ||:..  .|   .:...|||.|:..|..:..|::.::.|:.|.
Mouse   733 ALLELEKSVEYSTVVRPIC---LPDATHVFPAGKAIWVTGWGHTKEGGTGALILQKGEIRVINQT 794

  Fly   345 TCKQIYRKERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCA 409
            ||:.:      :|:.|.....|.|:|.||.|:||||||||:.:  .|.:...|..|:.|:|:.||
Mouse   795 TCEDL------MPQQITPRMMCVGFLSGGVDSCQGDSGGPLSS--AEKDGRMFQAGVVSWGEGCA 851

  Fly   410 APNAPGVYTRLYSYLDWIEKIAFKQH 435
            ..|.|||||||....|||     |:|
Mouse   852 QRNKPGVYTRLPVVRDWI-----KEH 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829 8/46 (17%)
Tryp_SPc 186..430 CDD:238113 87/255 (34%)
St14XP_036010597.1 SEA 108..198 CDD:460188
CUB 247..352 CDD:238001
CUB 360..464 CDD:238001
LDLa 474..506 CDD:238060
LDLa 512..543 CDD:238060 6/40 (15%)
LDLa 545..579 CDD:238060 9/54 (17%)
LDLa 587..622 CDD:238060 7/34 (21%)
Tryp_SPc 635..872 CDD:238113 88/260 (34%)
Blue background indicates that the domain is not in the aligned region.

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