DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and Plat

DIOPT Version :9

Sequence 1:NP_001097766.1 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_032898.2 Gene:Plat / 18791 MGIID:97610 Length:559 Species:Mus musculus


Alignment Length:261 Identity:81/261 - (31%)
Similarity:122/261 - (46%) Gaps:35/261 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDM-VRL 249
            |.||..|.....|..||: :.:...|..:  ::.|||.|:|..:||:||||......|..: |.|
Mouse   309 IKGGLYTDITSHPWQAAI-FVKNKRSPGE--RFLCGGVLISSCWVLSAAHCFLERFPPNHLKVVL 370

  Fly   250 GARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVK----FSEQVRPACLWQLPEL 310
            |..........:|..:|...::|.::....|.:|||||:|..:.|    .|..|..|||.. |.|
Mouse   371 GRTYRVVPGEEEQTFEIEKYIVHEEFDDDTYDNDIALLQLRSQSKQCAQESSSVGTACLPD-PNL 434

  Fly   311 QIP---TVVAAGWGRTE----FLGAKSNALRQVDLDVVPQMTC--KQIYRKERRLPRGIIEGQFC 366
            |:|   ....:|:|:.|    |.   |:.|::..:.:.|...|  :.::.|.      :.....|
Mouse   435 QLPDWTECELSGYGKHEASSPFF---SDRLKEAHVRLYPSSRCTSQHLFNKT------VTNNMLC 490

  Fly   367 AGYLPGG-----RDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDW 426
            ||....|     .|.||||||||:..::   |....:.||.|:|..|...:.|||||::.:||||
Mouse   491 AGDTRSGGNQDLHDACQGDSGGPLVCMI---NKQMTLTGIISWGLGCGQKDVPGVYTKVTNYLDW 552

  Fly   427 I 427
            |
Mouse   553 I 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_001097766.1 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 81/261 (31%)
Tryp_SPc 186..427 CDD:214473 79/259 (31%)
PlatNP_032898.2 FN1 38..80 CDD:214494
Important for binding to annexin A2. /evidence=ECO:0000250 39..49
EGF 83..115 CDD:394967
Kringle 124..205 CDD:395005
KR 210..295 CDD:238056
Tryp_SPc 311..556 CDD:238113 80/259 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 119 1.000 Inparanoid score I4773
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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