DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and try-5

DIOPT Version :9

Sequence 1:NP_001097766.1 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_505421.3 Gene:try-5 / 187088 WormBaseID:WBGene00006623 Length:327 Species:Caenorhabditis elegans


Alignment Length:317 Identity:75/317 - (23%)
Similarity:111/317 - (35%) Gaps:94/317 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 ISATKCQEYN-------AAARRLHLTD-TGRTFSGKQCVPSVPLIVGGTPTRHGLFPHMAALGWT 206
            |..||.:.||       :......||| .|.|               |.||      |:|.....
 Worm    16 IKGTKLKYYNDELCGRQSTYTSFMLTDAAGNT---------------GNPT------HLAPWAVQ 59

  Fly   207 QGSGSKDQDIKWGCGGALVSELYVLTAAHCATS--GSKPP------------------------- 244
            ....::..|.:..|||.|::..:|||||||...  |:|..                         
 Worm    60 IRVKARKGDFEVICGGTLITLKHVLTAAHCFQKHFGAKKEGGEENSMSGRYCESNQRFTDSEILT 124

  Fly   245 -DMVRLGAR---------QLNETSATQQDIKILIIVLHPKYRSSAYY-------HDIALLKLTRR 292
             .:|.:||.         .:||    :|:.|.|.|   .::....:|       :||.:|:|...
 Worm   125 RTVVTVGAMCTRLEQKYGCVNE----KQNGKTLKI---SRFAIGDFYKTHCEQGNDIVILELEST 182

  Fly   293 VKFSEQVRPACLWQLPELQIPT---VVAAGWGRTEFLGAKSNA---LRQVDLDVVPQMTCKQIYR 351
            :...|....|||..|||:.|.:   |.:.|||.....|..:.|   ::.:.|......||     
 Worm   183 IDDVEGANYACLPFLPEVNIQSGANVTSFGWGSDPGKGFDNAAFPMIQVLTLATETLATC----- 242

  Fly   352 KERRLPRGIIEGQFCAGYLPGGRDTCQGDSGGPIHALLPEYNCVAFVVGITSFGKFC 408
             |......|....||... ...::.|.|||||.: ......:...|::.|.|:|..|
 Worm   243 -EENWGTSIPFDSFCTAE-EEDKNVCSGDSGGGL-TFHQSDSAREFIIAIVSYGSDC 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_001097766.1 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 65/273 (24%)
Tryp_SPc 186..427 CDD:214473 65/273 (24%)
try-5NP_505421.3 Tryp_SPc 48..296 CDD:389826 64/268 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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