DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and try-3

DIOPT Version :9

Sequence 1:NP_001097766.1 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_001367393.1 Gene:try-3 / 183420 WormBaseID:WBGene00006621 Length:313 Species:Caenorhabditis elegans


Alignment Length:270 Identity:72/270 - (26%)
Similarity:106/270 - (39%) Gaps:69/270 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 GSGSKDQDIKWG--------------CGGALVSELYVLTAAHCATSGSKPPDMVRLGARQL---- 254
            |..|.|....|.              ||..::.:.:::||||||         ::|..|..    
 Worm    40 GGNSIDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCA---------LQLQTRSFVYVR 95

  Fly   255 NETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPE---LQIPTVV 316
            ...:..::...:....:|..|.:....:|||||:::..:. ...::|.||.....   .|....|
 Worm    96 EPKNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLS-KLGIKPVCLVHDDSKLLKQYKNGV 159

  Fly   317 AAGWGRTEFLG---------AKSNALRQVDLDVVPQMTCKQIYRKERRLPRGIIEGQFCAG-YLP 371
            ..|:|.|  ||         ..|..|:...:.::....|.:.:|....|...|...|.||| ||.
 Worm   160 VIGYGLT--LGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQICAGAYLH 222

  Fly   372 GGRDTCQGDSGGP--IHALLPEYNCVAFVVGITSF-----------GKFCAAPNAPGVYTRLYSY 423
            |   |..||||||  ||....||    ..:||||:           |||      ||||||:..|
 Worm   223 G---TAPGDSGGPLLIHKSNGEY----VQIGITSYGADGLDGVIDQGKF------PGVYTRISKY 274

  Fly   424 LDWIEKIAFK 433
            :.||:.:..|
 Worm   275 VPWIQGVIGK 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_001097766.1 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 71/265 (27%)
Tryp_SPc 186..427 CDD:214473 69/262 (26%)
try-3NP_001367393.1 Tryp_SPc 38..279 CDD:238113 70/263 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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