DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snk and CTSG

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_011534801.1 Gene:CTSG / 1511 HGNCID:2532 Length:269 Species:Homo sapiens


Alignment Length:246 Identity:87/246 - (35%)
Similarity:115/246 - (46%) Gaps:32/246 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 IVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHCATSGSKPPDMVRLG 250
            |:||..:|....|:||.|.....:|..      .|||.||.|.:|||||||..|...    |.||
Human    35 IIGGRESRPHSRPYMAYLQIQSPAGQS------RCGGFLVREDFVLTAAHCWGSNIN----VTLG 89

  Fly   251 ARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPACLWQLPELQIPTV 315
            |..:.....|||.|.....:.||:|......:||.||:|:|||:.:..|.|..|.:..|...|..
Human    90 AHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGT 154

  Fly   316 V--AAGWGRTEFLGAKSNALRQVDLDVVPQMTCKQIYRK--ERRLPRGIIEGQFCAGYLPGGRDT 376
            :  .|||||.. :...::.||:|.|.|.....|.:|:..  .||        |.|.|.....:..
Human   155 LCTVAGWGRVS-MRRGTDTLREVQLRVQRDRQCLRIFGSYDPRR--------QICVGDRRERKAA 210

  Fly   377 CQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYSYLDWI 427
            .:||||||:..     |.||.  ||.|:||....|  |.|:||:.|:|.||
Human   211 FKGDSGGPLLC-----NNVAH--GIVSYGKSSGVP--PEVFTRVSSFLPWI 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 87/246 (35%)
CTSGXP_011534801.1 Tryp_SPc 35..255 CDD:238113 87/246 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.