DRSC/TRiP Functional Genomics Resources

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Protein Alignment snk and LOC1281971

DIOPT Version :10

Sequence 1:NP_524338.2 Gene:snk / 41607 FlyBaseID:FBgn0003450 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_321961.3 Gene:LOC1281971 / 1281971 VectorBaseID:AGAMI1_007079 Length:260 Species:Anopheles gambiae


Alignment Length:266 Identity:67/266 - (25%)
Similarity:115/266 - (43%) Gaps:53/266 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 PLIVGGTPTRHGLFPHMAALGWTQGSGSKDQDIKWGCGGALVSELYVLTAAHC-----------A 237
            |.|:.||......||:..:|.|...:||:.:..   |.|:::::.::||||||           .
Mosquito    21 PPIIEGTEANLHEFPYQVSLQWNFNNGSRARHF---CSGSIINQRWILTAAHCLEEYTEDGWFEV 82

  Fly   238 TSGSKPPDMVRLGARQLNETSATQQDIKILIIVLHPKYRSSAYYHDIALLKLTRRVKFSEQVRPA 302
            .:|.........||::.|.|...|          |..|..||..:||.:|:|:..:..:..::..
Mosquito    83 VAGVNNIAHEEAGAQRRNVTRYEQ----------HESYDLSAIRYDIGVLQLSHPLDLTRNIKTM 137

  Fly   303 CLWQLPELQIPTVVA--AGWGRTEFLGAKS------NALRQVDLDVVPQMTCKQIYRKERRLPRG 359
            .| ...:..|...:|  ||||..    :|:      :.|.:|:|.:..:..|:.|.:        
Mosquito   138 RL-ATKDTLIHQKIAKFAGWGSI----SKTWEDIYPDKLMKVNLILRTEEDCQTIGK-------- 189

  Fly   360 IIEGQFCAGYLPGGRDT--CQGDSGGPIHALLPEYNCVAFVVGITSFGKFCAAPNAPGVYTRLYS 422
            |.|.|.|||   |.::.  |..|||||:...:   :.....:|:.|:|:.......|.||:.:..
Mosquito   190 IDETQICAG---GYKNVTGCTADSGGPLTVTI---DGEQMQIGVLSYGEKPCQARLPIVYSSVMY 248

  Fly   423 YLDWIE 428
            :.|||:
Mosquito   249 FHDWIQ 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snkNP_524338.2 CLIP 93..139 CDD:197829
Tryp_SPc 186..430 CDD:238113 66/264 (25%)
LOC1281971XP_321961.3 None
Blue background indicates that the domain is not in the aligned region.

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